Vespa velutina (Asian hornet): 124955019
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Entry
124955019 CDS
T09814
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124955019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124955019
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124955019
mRNA degradation factors
5'-3' decay
Decapping complex
124955019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ctf8
Motif
Other DBs
NCBI-GeneID:
124955019
NCBI-ProteinID:
XP_047364773
LinkDB
All DBs
Position
17:complement(823318..827588)
Genome browser
AA seq
728 aa
AA seq
DB search
MADSFFGFDTTLLDGIEDGLDCPLEEDDFGEEEYDALNDETFGSEATIGDWEKDHEKLAE
ITESSRSQHKNASDKKNGISVNIEDSLSHLVLDEKEGIVPKPGVWDSPNIPLPKPRPPPS
LATTLKNVCTVEELERGLIANRPPPGLTKPSQLQQQKPEGSFIFEALSLNDKLQINGLPT
SRFPPGLGLPGPHPMVMPPNLRLPHSQFMQHPRLLSNQPANVLRYPLPPHVMLPQGAQRQ
PIHGPFTSNFHHPPHPNLGPPQFLRQDHPMMPPFSSNQAGHQQHSFPHPGNQRNQNRLFY
SNEQQGNHQPFFKNNQYLHRNHDRNNQRYYHYQHHNHPQGINGLNNSGEYDEYAGLMSSR
EKQWLINIQLLQLNTNQPYVDDYYYTVFCDRQNKLNANQDQKDKKHNNNNGFQKDSRNRE
QPQHVASKVVYIPAQFENSLGKLQFSSVTAPRKIIDMDVVPNSDPHSTLQSQQKDTKKTR
QLFLEIERMYTILLKIEDLNNPLAVLSEQQQQDSETETNIVKKTGAELICMMLTSISQLI
QDDKIASMLSIRKGKTLLLRFLPLLNVIEYNSQLEGLWTCILRSLAIIGRRDTHLLTNFY
AEFRRWLDTVQDFNTVLRLTRALSESATQPVKNNSLVFALVNKFGVSVLAALLERAEKLY
PTNETLSSDWSNFIITLVELIGDTSPCVAPCQPVAASTLNQHLSRISSLKIDRYRVLELL
LTDANSSR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggtttcgacacaacgctcttagatggtatagaagatgggctt
gattgcccattggaggaggatgattttggtgaggaggaatatgatgcattaaacgatgaa
acctttggttctgaagctaccattggagattgggagaaagatcatgagaaacttgcagaa
attacagagtctagtaggtcgcagcataaaaatgcttctgataaaaagaatggtatcagt
gtcaacatcgaagatagtttatcgcatttagtattagatgagaaagaaggaattgtacct
aaaccaggtgtatgggatagtcctaatataccattacccaaacctcgaccacccccttct
ttggcaactaccttaaaaaatgtatgtacagtggaagaactggaacggggtcttatcgct
aatagacccccacctggtcttacaaaaccatctcaactgcaacaacaaaagccagagggg
tcatttatttttgaagctttatcattaaatgacaagcttcaaatcaatggcctacctact
tctcgatttccaccaggattaggtttacctggtccacatcctatggttatgccaccaaat
ttaagattaccgcattcacaatttatgcaacatcctagattattatctaatcaacctgct
aatgtattgcggtatcctttaccaccacatgttatgctaccgcaaggagcacaaagacaa
ccaattcatggaccatttactagtaattttcatcatccacctcatcctaatttaggacct
ccacagttccttcgtcaagatcatccaatgatgccaccattttctagtaatcaagctggt
caccaacaacattcttttccacatcctgggaatcaaagaaaccaaaatagattattttat
tccaatgaacaacaaggaaatcatcagccattttttaagaataatcaatatcttcatcgt
aatcacgatagaaataatcaaagatattatcactatcaacatcacaatcatcctcaagga
ataaatggtttaaataattctggagaatatgacgagtatgctggtcttatgagtagcaga
gaaaaacaatggttgatcaatattcaattgctacaattaaatacaaatcaaccatatgtt
gatgattattattatacggtattttgtgatagacaaaataaactaaatgcaaaccaagat
cagaaagataaaaaacataataataacaatggatttcaaaaagattctagaaatcgcgaa
caacctcaacatgttgcatcaaaagttgtatatatcccagcacaatttgagaattcatta
gggaagctgcaatttagtagtgttacggcgcctcgtaaaattatcgatatggatgttgtt
cccaatagtgatccacattcaactctgcaatctcaacaaaaagacaccaaaaagacgaga
caattgtttcttgaaattgaaaggatgtatacaatactgttgaaaattgaagatttaaat
aatcccttagctgtgctttcggaacaacaacaacaggatagtgaaacagaaacaaacatt
gttaaaaaaacaggtgctgaactaatctgcatgatgttaacgtctatttcccagctaata
caagatgacaaaatagctagtatgcttagtattcgtaaaggaaaaacattgctattgaga
tttttacctcttttaaatgtaatcgaatacaatagccagttggaaggtttatggacctgt
atattgagaagtttagcaattataggtcgtagagatacacatttattgacaaatttttat
gccgagtttcgaaggtggcttgacactgtacaggattttaatacagtactacgacttaca
agagcattatccgaatctgctactcaacctgtgaaaaataatagtttagtttttgctctc
gtgaacaagtttggtgtatctgtattagccgcacttttggaacgcgcagagaagttatat
cctacaaatgaaactttatcttctgattggtccaattttataataactcttgttgaacta
attggtgatacatcaccttgtgtagctccctgtcaaccagttgctgcaagtacacttaat
caacatttaagtcggatttccagtttaaaaattgacaggtacagagtgttagaacttttg
ttaactgatgccaactcttcacgatag
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