Vespa velutina (Asian hornet): 124955857
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Entry
124955857 CDS
T09814
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve04382
Cornified envelope formation
vve04512
ECM-receptor interaction
vve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124955857
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124955857
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124955857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vve04147
]
124955857
00536 Glycosaminoglycan binding proteins [BR:
vve00536
]
124955857
Exosome [BR:
vve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124955857
Glycosaminoglycan binding proteins [BR:
vve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124955857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
124955857
NCBI-ProteinID:
XP_047366846
LinkDB
All DBs
Position
19:complement(3549382..3561768)
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AA seq
1982 aa
AA seq
DB search
MTRLGLRLVASLVCLTRIVSEEYNYTWARNSQTVVPLDASRGDIRVDIRNDGGSNGTDDE
YPPPQTWKYSERKFDNQNRPGNGEGNSSNDFVEYDYGNNDPQHRQEYHSEGSRDGGSYGP
GHRDYSNNYPYNQETAGRYGGYTNGQESSGSGNNDDRYRYPPGQREHNQTEYGGGYEGNR
GFPYYYGQGQVPRTDNDRGPYDVNRAAIDPYGSHTSYDQESSYNTGYNIGYNRGQGGYGA
AGQSENYPSSYSAIPVPGATRSRNCTGSANCIPKCFAEKGSRGPPGTVGPQGPKGQQGFP
GSEGLLGPKGEKGDPGPQGPRGPKGERGKMGMPGFPGINGIPGVQGPPGFPGLPGRDGCN
GTDGAPGKDGQPGEIGPRGFRGPRGPKGEKGQPAFAGNFPVGQKGEPGIDGVRGPPGSPG
SQGQRGYPGPKGERGSQGAPGIPGPKGEKGNMGLGFEGLKGDKGQKGEQGPPGTSGPLVP
LLGGGSEMAGPPGETGEKGDRGDMGLDGQKGEPGMIGDHGLSGALGMKGEKGLPGAPGIR
GRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGHDGLMGVPGLRGPPGPPGGGKGR
PGPPGPKGPRGFPGPIGPRGSDGFPGDPGPKGPIGLQGGPGLQGIPGPEGLSGEKGAKGE
PGLTGFPGGAGPRGFDGPPGPVGPRGLPGEKGLSIMGPKGMDGIPGQDGEKGQKGERGYI
GVRGRPGDSLDGIPGSPGAPGLPGEPGTAGRDGTPGFPGTPGEKGDVGGRCQDCIPGSRG
AKGDRGFDGSPGLPGPRGPPGERGFPGEPGMDGLPGSMGPSGPPGRDGTPGSPGPQGSPG
APGIVTKDMLKLEKGEKGLRGEPGRQGPPGLEGPPGEKGRPGLEGFPGLKGQPGDRGFPG
QDGTPGRSGTPGRKGEKGISLKGEPGEAGRPGPPGAKGEPGFYGEKGEPGMCRPLNWMES
LKGNRGPTGDKGEPGPPGEDGLPGDKGLQGLQGPPGNVGPIGATGPVGPRGLPGPRGEKG
NTGPMGFPGEPGREGLRGYAGIPGGKGDKGEPGITVKGSPCLPGLPGSKGEKGLPGPPGK
EGQVGSPGLTGFTGEKGDVGIPGNNGLPGIPGEKGDTGPIGPPGPPGVAGTPGADGSKGE
PGLPGEPGRPGLPGFPGTKGDRGVPGIDGPKGYPGRRGLPGTLGRPGSEGLPGLKGERGE
KGSPGFPGLPGMEGKPGRSGLSGPKGDLGPEGLPGVPGLPGYDGPKGDTGPPGLPGRKGE
PGQVSEKGQKGEPGMPGIRGPPGPPGRDGYDGLKGEPGRPGVGRDGLPGLKGEAGPPGRD
GLPGLQGPKGDTGVRGFVGLKGDVGLPGEPGEPGTPGIDGLPGEIGEVGPPGAPGFPGAE
GKMGAPGRSGLDGVKGDRGFPGPVGVPGFPGAPGEKGDKGPPGPTITVKGEKGEPGHPGL
TGLPGSKGDRGLEGLAGYDGEKGDRGLPGPVGNPGPPGSMGLKGDQGPTGIPGLPGITIK
GEKGLPGLMGKHGRDGFPGLPGEKGERGLPGLPGPKGDIGPYGPIGPQGEKGDAGPIGLT
GPPGRDGAQGLEGVPGLPGERGPKGDRGQPGLFGAPGQKGEPGLPGHSGLDGVPGEKGDR
GWDGVNGLPGELGEKGDRGYPGSIGLMGAVGYIGAKGDKGDDCSPPPIGPKGDRGYPGPA
GLPGQPGEKGLSGPPGFPGVNGIKGAQGFMGSPGPIGLTGPAGPPGAPGLPGLEGPMGAP
GPVGEPGQSCETTPDYLTGILLVRHSQSQYVPTCEPGHIKLWEGYSLLFTDGDERAHSQD
LGYAGSCVRKFSTMPFLVCDVNSVCHYASRNDRSYWLSTNSPIPMMPAEESAIEEYISRC
VVCEVPANILAVHSQSLSIPECPNGWTGLWIGYSFLMHTGAGAQGGGQSLSSSGSCLEDF
RATPFIECNGAKGHCHYYSNEFSFWMATIEDSQQFQVPRKQTLKAGNLRSGISRCQVCIK
NT
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgactcgtcgcatccctagtctgcttgaccaggatcgtcagc
gaggaatataattacacatgggcaaggaactcgcaaacggtcgttcctttggacgcatcg
cgaggagatatacgagtcgatatacgaaacgatgggggatcaaatggtaccgatgacgaa
tatccaccccctcaaacatggaaatattcagaaaggaaattcgataatcaaaatagacct
gggaacggtgaaggaaattcgagcaacgactttgtcgaatatgattatggaaataacgac
cctcagcatcgacaagaatatcattctgaaggatcgagagatggcggatcttatggaccg
ggacatcgagattattcgaacaattatccatataatcaagagacagccggacgatacggt
ggatatacgaatggtcaagagtcatctggatcaggaaataacgatgatcgatatcgttat
cctcccggacaaagagaacacaatcaaacagaatatggaggaggctacgaaggtaatcgt
ggctttccttattattatggtcaaggccaagttccaagaactgacaacgatagaggacct
tatgatgttaatcgagctgctatcgatccttacggttcgcacacttcttatgatcaggaa
tctagttacaatactggttacaatattggttacaatagaggacaaggtggatacggagcc
gctggacaatcggaaaattatccaagcagttattcggctatccctgtacctggtgcaact
cgatctcgtaattgcactggatcggcaaattgcataccaaaatgctttgctgagaaaggt
tcacgcggtccacctggtacggttgggccacaaggaccaaaaggacagcagggatttcct
ggatccgaaggtctcttaggtccgaaaggagaaaaaggtgatcctggaccccaaggacca
cgcgggccgaaaggagaaagaggtaaaatgggtatgcctggttttcctggaataaacggt
attcctggagttcaaggaccacctggctttcctggacttcctggtagagatggttgtaat
ggaacagacggtgctccgggtaaagacggtcaacctggtgaaataggaccccgaggtttt
cgtggtcctagaggtcctaaaggagaaaagggtcaaccagcttttgcagggaattttcca
gttggtcaaaaaggagaacctggaatagacggcgtacgaggtccaccaggatctcctgga
tcgcaaggacagcgaggttatcccggcccgaaaggagaacggggatcacagggtgcacct
ggtatcccagggccgaaaggagagaaaggcaatatgggtcttggatttgaaggattaaaa
ggagataaaggacagaaaggtgaacaaggtcctcctggcacgtcgggacctctagtgcca
ttgttaggaggaggctcggaaatggctggaccacctggtgaaacaggagaaaaaggagat
agaggcgacatgggattggatggtcaaaaaggagaaccaggaatgatcggagatcatggt
ctttctggtgcattgggtatgaagggagaaaaaggtcttcctggagcgccaggtattcgt
ggtagggatggtttctccggacctcccggtccacctggtcgtaaaggtgatcgaggttat
gacggattggatggtcttcctggtcgaccaggacaaaaaggagaacccggtcatgatgga
cttatgggagttccaggattgcgaggaccacctggtccaccaggtggtggcaagggaagg
ccgggaccaccaggtcctaaaggtccacgaggttttcctggcccaatcggtcctcgaggt
tccgatggatttccaggcgacccaggtccaaaaggtcctatcggcttgcaaggtgggcct
ggtttacaaggaattccaggtccggaaggtttgtcgggagagaaaggggcaaaaggagag
ccaggacttactgggtttcctggtggggctggtcctcgtggtttcgacggtcctccggga
ccagtaggtccgcgaggtttgccgggagaaaagggattatcgattatgggtccgaaagga
atggatggtatacctggtcaagatggggaaaaaggacaaaaaggagaacgtggttatatt
ggagtacgaggtcgaccaggagactccttggatggtattccaggttcacctggagcacct
ggattacccggagaacctggaacagcaggaagagatggtacacctggtttccccgggaca
cccggtgagaaaggagatgttggtggtcgttgtcaagattgcataccaggatcgcgaggt
gcaaaaggagatcgcggtttcgatggtagccctggcctgccaggtccacgtggaccgcct
ggggaacgcggatttcccggggaaccaggtatggatggactaccaggatctatgggacca
tcaggaccaccgggaagagatggcactccaggatctcctggacctcaaggatctcccgga
gcacccggcatagttacgaaagatatgttgaaattggaaaaaggcgaaaaaggattgcga
ggagaaccaggacggcaaggcccgccaggactagaaggaccaccaggagaaaagggtaga
cccggattggagggcttcccaggattgaaaggacagccgggagatcgtggatttccagga
caagatggtacacctggtagatcaggaacacctggacgtaagggtgaaaaaggaattagc
ttgaagggagagcctggagaagcaggaagaccgggacctcctggagcaaaaggtgaacct
ggattttatggtgaaaagggtgaacctggtatgtgtcgacctttgaattggatggaaagc
ttgaaaggcaatagaggtcctacgggtgataaaggtgaaccaggaccccccggagaagat
ggattaccaggtgataaaggtttacaaggacttcagggtcctccaggaaatgttggtcca
attggtgcaactggtcctgtagggccacgaggtttaccaggtcctcgaggagaaaaaggt
aacacaggaccaatgggttttccgggtgaacctggtcgtgagggacttcgaggatatgca
ggtatacccggtggaaaaggtgataaaggagaaccaggaataactgtgaagggcagtcct
tgtttacccggattaccgggatcgaaaggagaaaaaggtcttcctggtccaccaggaaaa
gaaggtcaagttggatcgccagggttaacaggatttactggtgaaaagggagacgtcggc
attccaggtaataatggattaccaggtataccaggagagaaaggagataccggtccaatt
ggaccaccaggacctcctggggtcgctggaacacctggagctgatggcagtaaaggtgaa
cccggattaccaggagaaccaggtagaccaggccttccaggattccctggtacgaaaggc
gatcgtggagttcctggtatcgatggaccaaaaggatatcctggacgacgcggattgcct
ggtacacttggtagacctggcagcgaaggtttacctggtttgaaaggtgaaagaggcgaa
aaaggatcaccaggtttccctggcttacccggcatggaaggaaagcctggtcgatccggt
ttatcaggaccaaaaggagatcttggtccagaaggtcttcctggtgtgccaggtttaccc
ggatatgacggaccaaaaggtgatacagggccaccaggattacccggccgaaaaggagaa
ccaggacaagtatcggaaaaaggacaaaagggtgaaccaggaatgcctggcattcgtgga
cctcctggaccaccaggaagagatggatacgatggactcaaaggagaacctggaagacca
ggtgtaggacgtgacggcttgcctggtttaaaaggagaagcgggaccaccaggacgcgat
ggtttaccaggattgcaaggtccgaaaggtgacacaggcgtacgaggattcgttggtctg
aaaggggatgtgggtttgccgggagaaccaggagaaccaggtacgcctggaatcgatggt
ttaccgggtgaaattggagaagtcggacctcctggagcacctggtttccctggagccgaa
ggaaaaatgggagcaccaggacgatctggactcgatggtgttaaaggcgatcgcggtttt
cccggtcctgttggcgttcctggttttcctggtgcacctggtgagaaaggagataaggga
ccaccaggaccaaccattacagtaaaaggagaaaagggcgagcctggtcatcctggttta
actggattacctggaagtaaaggagatcgtggtttagaaggtttagccggatacgatgga
gagaaaggagatagaggcctgcctggcccggttggaaatcctggaccgcccggttcaatg
ggccttaagggtgatcaaggtcctactggtattcctggtcttcctggaataacaataaag
ggcgagaaaggtttaccaggtttgatgggtaagcacggacgagatgggttcccaggtctt
ccaggagagaaaggagaacgaggacttcctggattgcccggaccgaaaggagatattggg
ccctacggtcctattggacctcaaggtgaaaagggtgatgcaggtcctatcggtcttacg
ggtccacctggacgcgatggagcgcaaggtctggaaggagtaccaggtttgccgggtgaa
agaggtccaaaaggagacagaggacaaccaggacttttcggcgcaccaggacagaaagga
gagcctgggctaccaggtcatagtggcttagatggcgttcctggagaaaaaggtgataga
ggctgggacggagtgaacggacttcccggagaactcggtgaaaagggagatcgaggatat
cctggttcaataggtttaatgggtgccgttggttatattggtgctaagggtgataagggt
gatgattgtagtccaccgcccataggaccaaagggtgatcgcggttatccaggtcctgcc
ggattacctggacaaccaggcgagaaaggactctcaggaccgccaggtttcccaggagta
aatggtataaaaggagctcaaggattcatgggatcacctggcccgattggattgacaggt
cctgctggtcctcctggtgcacctggtctgccaggtctcgaaggtcctatgggagctcct
ggaccagttggagagccaggacaatcgtgcgaaaccacacccgattatcttaccggtatt
ttactagtccgacatagtcaaagtcaatacgtaccgacctgcgaaccaggtcacatcaaa
ttatgggaaggttatagtttattattcacggatggcgacgagagagctcattctcaggat
ctaggttatgctggttcgtgcgtaagaaaattctcaacgatgcccttcctagtttgcgac
gtcaacagtgtttgtcattacgctagtcggaatgatcgttcttattggctatcaactaat
agtccaattcctatgatgccagccgaggaatcggcgatagaagaatacatctcaagatgt
gtggtatgcgaagttccagctaatattctggcagtacacagtcagtctctaagcattccg
gaatgtccaaatggatggaccggactttggattggatatagttttttgatgcacactggc
gcaggtgctcagggtggcggacaatcattgtccagttctggttcgtgcttggaagatttc
cgggcaactcctttcattgaatgcaatggcgcgaaaggtcactgccattattattcgaac
gagtttagtttttggatggccaccatagaagatagccaacaatttcaagtgcctagaaaa
cagaccttaaaggcaggaaaccttaggtcgggaataagtcgctgccaagtttgtataaag
aatacgtaa
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