Vespa velutina (Asian hornet): 124956326
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Entry
124956326 CDS
T09814
Name
(RefSeq) transcription factor Sox-1-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
vve
Vespa velutina (Asian hornet)
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vve03000
]
124956326
Transcription factors [BR:
vve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124956326
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
Motif
Other DBs
NCBI-GeneID:
124956326
NCBI-ProteinID:
XP_047367960
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Position
1:19297009..19622701
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AA seq
620 aa
AA seq
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MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGTLGSIVHSPALSGSPPSSSTLG
LGLQHHHQPQHHYASMQAAAAAAQQQQQQQQQQQQQQQQQQQQQQNMHTLAAQQSAAQQQ
HHPHQQPQQPQQQQSQNQHHQPPNNNNNTNKNNNIDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKD
KFPLGGGVGGVGVGVGVGGILGVDQRQVGSTGGPQQGQISREVYQMPNGYMPNGYMMHDP
TAAAYQQHVAYGGHMGGAAAAAAAAGYPRYDMGHHMGGGSPPINSYMNGYGGYAGTTVPG
GSPSPYHQPQSGSQMSSHSPSGSSIKSEPTSPASAGIHTPTPTSGPGASSAASGPQQQQQ
AQQQQAAAAAAAAAVKREYMGQQTHQTHQSQGDLRQMISMYLPQGVDQGVVQHGAGVYSP
GPSPDPLAQHHSIPPLSHMSESDRKMLNPETGCYSESVRACFCGRNDAEERRREERRGRP
QLQQRQRQRQRQRQRQRRRQRRRQRRRRRRRRRRRRMMRRVGERRIGTRRATCAYKSPGR
RERISPRLTRTSPTTKDQDP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacctaaaaggcggtagcctgcatggtcagatgccaccgcat
ccgcaccaaggtgtatcgccgatgggtcaccataccggcgtgtcgccttacggaacacta
ggttccatagttcatagtccagccctatccggaagtccacctagcagtagtaccctagga
ttaggtctacagcatcatcatcagccgcaacatcattacgcttcaatgcaggcggcagct
gctgcagcccaacagcagcaacagcagcaacaacaacagcaacaacaacaacagcagcag
caacagcaacaacaaaacatgcatacccttgcggctcagcaaagtgccgcacaacagcaa
catcatccccatcagcaaccgcaacaaccacagcagcaacaatcccaaaatcaacatcat
cagccaccaaataataacaataatacaaataagaacaataacatagacagagtaaaaagg
ccaatgaacgcttttatggtctggtcccgtggtcagcggcgtaagatggctcaagagaat
cccaagatgcacaattctgagatatctaaacgcttaggagccgaatggaaattacttagc
gaaacggaaaaacgtccgtttattgacgaagcaaagcgattgcgtgcggtgcacatgaaa
gagcacccggactacaagtatcgtccaagaagaaaaacgaaaacacttttgaaaaaagac
aagttcccgctcggcggcggtgtcggaggagttggagttggcgttggtgtcggtggcata
ttgggggtcgatcaaagacaagtcggtagtacgggtgggccccagcaaggacagatatcc
cgagaggtctatcagatgcctaacggatatatgccgaatggttatatgatgcacgatccg
acggccgctgcgtatcagcagcacgttgcctatggtggtcacatgggtggagcggcggca
gccgcggccgctgctggatatccaagatatgatatgggacatcatatgggtggtggcagt
ccaccaataaacagttatatgaatggatatggtggttacgctggaaccactgtacccggc
ggctcaccttcgccctatcatcagcctcaatctggatcccaaatgtccagccacagtcct
agcggcagcagtataaaatctgagccaacgagtcctgcgagtgcgggtatacatactccc
acacctaccagcggaccgggcgcctcgagcgcagcgtctggtccgcaacagcagcaacag
gcgcaacaacaacaagctgctgctgctgctgctgccgccgccgttaaacgtgaatatatg
ggccaacaaacccatcaaactcatcaatctcagggagatcttagacagatgatatccatg
tatttgccgcaaggcgtcgaccaaggggtcgtccaacatggtgctggtgtctattctcct
ggtccatcaccggatcctttggcgcaacatcattcgataccacctctcagtcatatgtct
gaaagtgatcgaaaaatgttgaatccagaaaccggttgttattcggaatccgtacgagca
tgcttttgcggaagaaacgatgcggaggagaggagaagagaggagaggagaggacgacca
caactacaacaacgacaacgacaacgacaacgacaacgacaacgacaacgacgacgacaa
cgacgacgacaacgacgacgacgacgacgacgacgacgacgacgacgaatgatgaggaga
gtaggagaaagaaggattggaacgcgacgggcaacgtgcgcgtacaagagtcctggccga
cgtgagcggatttcgccgcggctaactcgaacttctccaacgacgaaggatcaggatcct
tga
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