Vespa velutina (Asian hornet): 124956606
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Entry
124956606 CDS
T09814
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
vve
Vespa velutina (Asian hornet)
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vve03041
]
124956606
03016 Transfer RNA biogenesis [BR:
vve03016
]
124956606
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124956606
Spliceosome [BR:
vve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124956606
Transfer RNA biogenesis [BR:
vve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124956606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
PGK
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124956606
NCBI-ProteinID:
XP_047368616
LinkDB
All DBs
Position
1:11166709..11170269
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AA seq
730 aa
AA seq
DB search
MAAFEEMGVLSEIAQAVEEIDWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDMESGKINNSTKELSHSIHWGLSLFDRDHALAVTPDSLRCQSREPKEWHGC
RANKGVQGDGKFFFECVPTDEGLCRVGWSTSQASLDLGTDRFGYGFGGTGKKSNAKQFDN
YGEPFGMHCIIGCLLDLSNGIIRFTKNGVDLGVAFTLNPQQKSQIFFPAVVLKNAEMSFN
FGAQPFKYPPPNDYIAISSAPKDYVRLNPINSSHSQSVGSNKPINNAPQAIIIEPSRELA
EQTYNQIQKFKTHLNNPTVRELLVIGGVSVKEQISMLNSGVDIVVGTPGRLEDLIQGGYM
SLTHCRFFVLDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHSFEVKKMA
ERLMHFPTWVDLKGEDIVPETVHHVVVIVDPQKDKLWQNLRRNIETDGVHSRDNIKPGNN
TAEVLSEAVKILKGEYCIRAIREHKMDRALLFCRTKLDCDNLERYLKQVGGSELSCVCLH
GDRKPQERKANLEKFKKKEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSNVPEKVWYHGEWCHSRGRNCHNTNLTDQGGCCTWYNEPRYLADIED
HLNVTIEQVGSDIKIPINEFDGKVSYGEKRAAMGTNYENHVHQMAPIVAELTALESKAQL
IYLNRHLIVY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtttgaagaaatgggtgtactgtctgaaatagcacaagctgttgaagaaata
gattggatgctaccgacagatgtgcaggcagaggctattcctttaattttgggtggaggt
gatgtattaatggctgcagaaactggaagtggaaaaactggagcattttgtttaccaatt
ttgcaaattgtatgggaaacattaaaagatatggaatctggaaaaattaacaactctaca
aaagaattatcacattctatacattggggattgagcctatttgatagagatcatgctcta
gctgtgacgccagatagtttaagatgtcagagtcgtgagccaaaggaatggcatggatgc
cgtgccaataaaggagtacaaggagatgggaaatttttttttgaatgcgtacccacagat
gagggtttatgtcgcgtggggtggtctacgtctcaggcttctttagatttaggaacagat
agatttggctatggctttggaggtactggtaaaaagtccaatgcaaagcaatttgataat
tatggtgaaccttttggaatgcattgtataattggatgtttacttgatttatcaaacggc
ataataagattcacaaaaaatggtgtagatctgggtgtagcttttacattgaatccccaa
cagaaatcgcaaatttttttcccagctgttgtactgaaaaatgcagaaatgtcatttaat
tttggtgctcaaccatttaagtatcctccaccaaatgattatattgctatatcttcagct
ccaaaagattatgtgagacttaatcctattaacagtagccatagtcaaagcgtaggaagt
aataaacctataaacaatgcaccacaggctataattattgaaccttctcgggaattagct
gaacaaacctataatcagatacaaaaatttaaaacacatttaaacaatcctacagttcga
gaattattagttattggaggagtaagtgtaaaggaacagatttcaatgttaaattcaggt
gttgatatagtagttggcacacctggtcgtttggaagatctaatacaaggaggatacatg
tcattgacacattgcagattttttgtattggacgaagctgatggattattaaagcaagga
tatacagaacttattgatcgtctacatagacaaattcctaagattacatcagatggaaaa
agattgcagatgattgtatgttcagcaactttacattcatttgaagtaaaaaagatggct
gaacgtttaatgcattttccaacgtgggttgatttaaagggagaagatatagttcctgaa
actgttcatcatgtcgtagtaatagtagatccccagaaagacaaattatggcaaaactta
agaagaaatattgaaacagatggagtgcatagtagggataatataaaacctggaaataac
acagctgaagtattgtcagaggctgttaaaatattaaaaggagagtactgtatccgtgct
ataagggaacataaaatggatagagcattacttttttgcagaacaaaacttgactgtgat
aatttggaacgttatttgaagcaagtaggaggaagtgaactttcatgtgtttgtttgcat
ggtgatagaaaaccacaagaacgtaaagcgaatttagagaaattcaaaaaaaaagaagta
aagttcttaatttgcacagatgtagcagcaagaggtctagatataaccggtttgccgttc
atgatcaatattactttgcccgatgaaaaatcaaattacgtgcatagaattggaagagtc
ggtagagctgaacgaatgggtttagctatttctttagttagcaatgtaccagagaaagta
tggtatcatggtgaatggtgtcattctcgcggtagaaattgtcataatactaatctcact
gatcaaggtggatgttgtacttggtataatgaacctagatatctggcagacattgaagat
catttgaatgtaacaattgaacaagttggctcagatataaagattccaataaatgaattt
gatgggaaagttagttatggagaaaaaagagcagctatgggaaccaattatgaaaatcac
gtacatcaaatggcacccatcgttgctgaattgactgcactagaatcaaaagcacaactg
atatatctaaatagacacctaatagtatactaa
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