Vespa velutina (Asian hornet): 124956708
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Entry
124956708 CDS
T09814
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124956708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124956708
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124956708
U7-dependent histone pre-mRNA processing factors
124956708
BRITE hierarchy
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
124956708
NCBI-ProteinID:
XP_047368830
EnsemblRapid:
ENSVVEG00005014392
LinkDB
All DBs
Position
23:complement(3293095..3297102)
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AA seq
735 aa
AA seq
DB search
MTSIIKLHAISGAMDESPPCYILQVDELRILLDCGWDENFDQDFIRELKRHVNQIDAVLL
SYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVD
AAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCSNPQNSIILTSRTS
PGTLARDLVEKGGNRNISLEVKKRIKLEGIELEEYLKKERIKQEQMKQEQMETADVSSES
EDEIEVGGGRGKHDLLVKQESKPGFFKQNKKQHPMFPFIEEKIKIDEYGEIIRPEDYKIA
ETIPEVEDNKENVETKQEEAIHHPEVPTDIPTKCVQVMRTMTVNASVTYIDFEGRSDGES
LQKILAQLRPRRVVLVRGSKKDTEILAQQAQSAGARVFTPARGETLDATTETHIYQVRLT
DALVSGLNFSKGKGDSEVAWVDAMITARDPVCRDAVAENEQLEENSDKILTLEPLLLNEV
PGHQTTFINELKLSDFKQVLNRSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEE
YYKVRELLYEQYAIV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattataaaacttcatgccatatctggagcaatggatgaatctccaccttgt
tatatattacaagttgatgaattaagaatattactcgattgtgggtgggatgaaaatttt
gatcaagattttataagagagttaaaaagacatgttaatcaaatagatgcagttttgctt
tcatatccagatccattgcatctaggtgcactgccgtatttagtaggaaaatgtggtttg
aattgtcctatatatgctacaatacctgtttacaaaatgggacaaatgtttatgtatgat
atgtatcagtctcgccataatatggaagactttgatttatttactcttgacgacgtagat
gctgcatttgataaaattgtgcaattaaagtataatcaaagcatatcgatgaaaggtaaa
ggttatggtgttactttaacacctttacctgctggacacatgattggtggaacaatttgg
aagattgttaaagtaggggaagaagatataatatatgctgttgatttcaatcataaaaaa
gaacgtcatttaaatggatgtgaattggaaagactacaaagaccgtcattacttataaca
gatgcttttaatgccacgtatcaacaagctagacgtagaactagggatgaaaaattaatg
acaaatatcttacaaacgttaagaggtggtggaaatgttcttgtcagcgtggatactgct
ggacgagttttagaactagcacacatgttggatcaattatggcgcaataaagagtctggt
ctacttgcttattcattggcacttttgaataatgttagttacaatgttgttgaatttgca
aaatctcaaatagaatggatgagcgacaagctcatgagaagtttcgaaggtgctagaaat
aatccatttcaattcaaacatttacaactttgccatagtatggctgaattaaatcaagta
ccaagcccaaaggttgtacttgcaagtactccggatatggaatgtggtttttcacgggaa
ctttttctccagtggtgtagtaatccacaaaatagcattatattaacaagtagaacatct
ccaggaacacttgccagagatttagtagaaaaaggaggaaacagaaatatttctttagaa
gtaaaaaaacgcatcaaattagagggtatagaattagaagaatatttaaaaaaagaaaga
ataaaacaagaacaaatgaaacaggaacaaatggaaactgcagatgttagttcagaatct
gaggacgaaatagaagtaggaggtggaagaggaaaacacgatttgttggttaaacaagaa
agtaagcctgggttttttaaacaaaataaaaaacaacatcctatgtttccatttatcgaa
gaaaaaataaagatagatgaatacggtgaaattataagaccagaagattataagatagca
gaaaccataccagaggtagaagataataaggaaaatgtagagacaaaacaagaagaagcc
atacatcatccagaggtacccactgatattccaaccaaatgcgtacaagttatgcgtaca
atgacagttaatgcatctgtcacgtacatagattttgaaggaagatcagatggagaatct
ctacaaaaaatcctagcacaattaaggccacgacgagttgttcttgttagaggatccaaa
aaagacacagaaattttagcacaacaagcacaaagcgccggtgctcgtgttttcacacct
gcgagaggagaaacattagacgctacaaccgaaactcatatatatcaagttcgtttgaca
gatgctttagtaagcggattaaatttttcaaaagggaaaggtgattcagaggttgcatgg
gtagatgctatgatcacagctcgcgatccagtttgtcgagatgctgtagcagaaaacgaa
cagttggaagaaaatagtgataaaatacttacacttgaacctttactgctaaatgaggtt
cctggacatcaaactacatttataaatgaactaaaattatcagactttaaacaagtttta
aatagaagtaacattccatcagaatttagtggaggagttttatggtgttgtaataatacc
atcgctgtcagaaggcatgaagcaggaaaagttatattagaaggttgtatatctgaggaa
tattataaagtacgtgaactgctatatgagcaatatgcgattgtataa
DBGET
integrated database retrieval system
