Vespa velutina (Asian hornet): 124957103
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Entry
124957103 CDS
T09814
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve04512
ECM-receptor interaction
vve04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124957103
04518 Integrin signaling
124957103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vve00536
]
124957103
Glycosaminoglycan binding proteins [BR:
vve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124957103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
124957103
NCBI-ProteinID:
XP_047369754
LinkDB
All DBs
Position
24:1551115..1559988
Genome browser
AA seq
1502 aa
AA seq
DB search
MKRGYLNLAAGLLILQFLFLPQIYSIKTRQRKHRLRQVQSQEPVNSDYTEYDYYNNYEDY
EDKNATSPLSSSSIPPTNANISERRREMIESTLSYRSELPTDIPASQTTARLFDQEDLHS
TMETYNNYNSLAKEIIPGESNHINSVAIAGPRGQPGRPGDSGRPGDVGFPGQPGTPGIPG
PPGPPGPLPDVSMYYQQLALSQASEDKGPSDAAYIPNYIQTNVGPIGPRGPAGPAGSPGP
QGFQGLRGEPGEPGLPGAPGAPGPRGLPGLPGRDGEGGENGEIGPPGSPGPVGPRGLSGM
PGIPGIKGHRGFPGLDGAKGEQGISGEKGSTGAPGPMGPIGPVGPVGQRGERGREGLSGP
PGIRGIDGLPGPPGQSGALGKPGPPGFPGNPGFKGDQGAQGPKGSQGLQGPRGESGRPGQ
PGESGPQGLQGKDGISGEKGSPGTPGSVGLPGFPGSRGQPGIPGNPGLSGVKGMPGLPGE
RGFKGDAGTKGDQGAPGPRGFPGPPGPEGKRGKRGLHGPIGAPGLPGERGTPGIRGLPGI
DGPMGPKGQSGDRGPIGPIGPKGAMGDPGRPGSPGIQGARGVIGRPGSPGKPGNVGERGI
QGADGKPGEQGPQGPQGLPGPLGSPGEKGFPGEAGKDGEPGNLGPPGPRGDAGKEGSPGL
QGPPGPPGSTGERGSQGLTGPRGFQGIPGVAGNPGIPGKDGEMGVQGPPGPTGSSGNRGE
RGFPGERGLIGAPGLTGPRGEPGVQGVDGLPGFPGIKGDMGHPGPSGLVGLPGIRGLPGE
SGQKGERGMMGPVGPEGPSGRIGERGPQGLVGPPGLPGEPAERGDTGLPGPPGETGAPGA
QGEKGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGSKGDQGNSGLPGSPGEVGPPGLTGL
TGAKGIRGEPGPRGEVGSIGPPGPAGITGQPGLPGLAGPTGPPGLPGIKGNAGDTGRPGN
PGSMGNPGIPGADGIKGESGAQGPPGFIGSQGLQGLPGERGLPGLPGPTGLIGARGIRGA
TGETGLPGKPGIEGPPGPPGLTGPVGPPGPIGEQGPEGPSGKPGPPGISGRPGDKGPPGA
IGIEGPIGPPGIPGPPGSAGLSGPIGERGPKGETGPQGVEGQQGARGKPGPTGIQGAKGE
RGEEGAKGAKGHRGFNGLQGLPGSPGIPGDKGMPGMPGLPGKDGETGIRGSPGRDGNPGI
IGITGNPGPRGPPGEEGRHGLPGPPGPPGPPGPPGELGLGYDVTSLAAFLGQSQTKGPDP
LIGDEPTRLFGKEITEEERKNLVLKAYEQLKSSFQKLVKPDGQKNSPAKTCRDLFVAYPE
KISGEYWIDPNEGDTRDAILVYCDSEKHATCILPNPSRTGEINYIGEQQEVWLSEIGDAK
IMYKADSNQISFLQLLSKHAQQNITYHCKNSVAYFDSERKSYRRSMKLLAWNDVEIMPRG
NQRLRYDMIIDECRLRHNYWSQTIVSYNSDKPVRLPIIDVALRDIGLPDQIFSIEIGPAC
YQ
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagggtacctcaatttggccgctggccttttaatattacaatttttatttcta
ccccaaatatattcgattaaaacgaggcaaaggaaacatcgacttaggcaggtccaatct
caggaaccagttaacagtgattataccgaatacgattactataataattatgaggactat
gaggataaaaatgcaacatcgccattatcatcgtcatctatccccccaacaaatgccaat
atttcggaacgtagaagagaaatgatcgaatcgaccttgtcatacagatcagaattacct
accgatatacctgcgtcccaaacaacagcacgattattcgaccaagaagatttgcattcg
acaatggaaacttataataattataattcattagcgaaggaaattattcccggggaaagt
aatcacataaattccgtggcaatagctggaccacgtggacaacctggacgtccaggcgac
agtggaagaccaggcgacgtaggctttcctggacaaccgggtacacctggaattcctgga
ccacctggaccacctggacctttacccgatgtgtcaatgtattatcaacaacttgcatta
tctcaagcgagtgaggataaaggtccatcggatgctgcatatattccaaattatattcaa
accaatgtaggtcctatcggtccccgaggacctgcaggaccagcaggttcacctggtcca
caaggttttcaaggtcttcgtggagaacctggagaaccaggattaccaggtgcaccagga
gctcctggtccacgaggtttgccaggattgccaggaagggatggtgaagggggtgagaat
ggagaaataggtccaccaggatcaccaggtccagtaggtccaagaggactttctggaatg
cctggtataccaggtataaaaggacatcgtggctttccgggattagatggtgctaaaggt
gagcaaggtatatctggagaaaaaggatctacaggagcacctggtccaatgggacctata
ggaccagtgggacctgttggtcaacgcggagaaagaggcagggaaggattatcgggtcca
cctggaataagaggaatcgatggtcttcctggaccaccaggtcaatctggtgctttaggt
aaacccggtccacctggattcccaggtaatcctggatttaaaggagatcaaggagctcaa
ggtccaaaaggaagtcaaggcttacagggtccacgtggcgaatcaggacgcccaggacag
cctggagaatctggcccgcaaggtttacaaggaaaagatgggatatctggtgaaaaagga
agtccaggaacacctggctcagttggtttacctggtttccctggatctcgtggacagcct
ggtataccaggtaatcctggtttatcaggagttaaaggaatgcctggactacctggtgaa
agaggttttaaaggtgacgctggaacaaaaggagatcaaggagcacctggtccacgtggc
tttccaggaccacctggtcccgaaggaaaaagaggaaagagaggattacatggcccgata
ggagcacctggattacctggtgaacgtggcacgccaggaatacgtggtttgcccggaatc
gatggccctatgggccctaaaggtcaatctggtgatcgtggacccattggtcctataggt
cctaaaggagcaatgggagatccaggtcgtccgggatctcccggaatacaaggtgcacga
ggtgtaataggtcgtcctggttcacctggtaaaccaggtaatgtaggagaacgtggaatt
caaggtgcagatgggaaacctggcgaacaaggtccacaaggaccacaaggtttacctgga
ccattaggttctccaggagagaaaggctttccaggtgaagctggcaaagatggtgagcct
ggtaatcttgggccacccgggcctagaggtgacgctggtaaagaaggctctccaggatta
caaggcccaccaggaccacctggtagtactggggaaagaggatctcagggattaacaggg
cctagaggttttcagggtattcctggagttgctggcaatcctggaataccaggtaaagat
ggtgaaatgggggttcaaggacctcctggtcccacgggttcttctggaaatagaggcgag
cgtggttttcccggtgaaaggggactaattggagcaccaggattgacaggacctagagga
gaaccaggcgttcaaggtgtcgacggacttcctggatttcctggcattaaaggagatatg
ggacatcctggtccatcaggattagtgggtttacctggaatacgtggcttacctggagaa
tctggacagaagggtgaaagaggaatgatgggtccagttggacccgaaggcccgtcgggt
cgtatcggagaacggggcccgcaaggactagttggtcctccaggacttcctggagaacca
gctgaaagaggagatacaggtttgccaggtccgccaggtgaaacaggagctccgggtgcg
caaggagaaaaaggaccacaaggtttacagggattgcaaggatttccagggccgcaagga
cttattggacttccaggattaaaaggagatcgtggttatccaggttcgaaaggagatcaa
gggaattcaggattgcctggtagtccaggtgaagtaggaccaccaggtttaacaggcctg
actggtgcaaaaggaatacgaggagaacctggtcctagaggagaagtaggctctataggc
cctcctgggccagcaggcataaccggacaacccggactgcctggactagctggtcctaca
ggaccacctggattgcctggtattaaaggtaatgctggagatacaggaagaccagggaat
cctggttctatgggaaatcctggtattcctggtgcagacggaattaaaggtgaaagtgga
gcacaaggtccaccaggttttataggatcacaaggactgcaaggtttaccaggagaacgt
ggtttgccaggacttcctggtccaacgggactaataggtgctagaggaatacgcggagct
acaggtgaaacaggtttgccgggaaagccaggaatagaaggaccacctggaccaccagga
ttaacgggtccagttggacctcctggtcctatcggtgaacaaggtcctgaagggccttct
ggtaaaccaggtccacctggaataagtggtcggcctggtgacaaaggaccaccaggtgct
attggaatagaagggccaattggacctcctggtataccaggacctccgggtagtgctgga
ttatctggtcctataggagaacgtggtccaaaaggagaaacaggaccacaaggtgtagaa
ggacaacagggtgctagaggaaagcctggtccaacgggtatacaaggtgcaaaaggtgaa
cgtggtgaggaaggtgcgaaaggtgctaaaggacatcgtggattcaatggtttacaaggt
ttacctggatcaccaggtattcctggagataaaggtatgccaggaatgcctggtttacca
ggaaaagacggtgagacaggcattagaggaagtcctggtagagatggaaatcctggaatt
attgggattactggtaatccaggaccaagaggtcctcctggagaagaaggtcggcatgga
ttaccaggtccacctggtccaccaggaccaccaggacctcctggggaacttggattagga
tatgacgtaacctcattagcagctttcttaggacaaagccaaacaaaaggacctgatcca
ttaataggcgacgaaccaacaagattatttggaaaagaaattacggaagaggaacgtaaa
aatctcgtattaaaggcatatgagcaattaaaatcgtcatttcaaaaattagttaaacca
gatggacagaaaaattcgccagctaaaacttgcagagatttgtttgttgcctatccagaa
aagatatctggagaatattggattgatccgaatgaaggtgacacacgagatgcaatctta
gtttattgtgattctgagaaacatgcaacttgtattttaccaaatccatctcgtacagga
gagatcaattatatcggtgaacaacaagaagtttggttgagtgaaataggagatgcaaag
attatgtataaagcagacagcaatcaaataagtttcttgcaattgctttcgaaacatgcc
caacagaatataacttatcattgcaaaaatagtgtagcatattttgattctgaacggaag
agttatagaagaagtatgaaacttcttgcttggaatgatgttgaaataatgccacgtggt
aatcaacgtttgcgatatgatatgatcatagacgaatgcagattacgtcataattattgg
agtcaaactattgtttcatacaattcggataaaccagtaagacttcctataatagacgta
gctctacgagacattggactacctgatcagattttctctatcgaaataggaccagcttgt
tatcaataa
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