Vitis vinifera (wine grape): 100233039
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Entry
100233039 CDS
T01084
Name
(RefSeq) polygalacturonase precursor
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100233039
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100233039
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
100233039
NCBI-ProteinID:
NP_001267980
UniProt:
B4XRZ2
LinkDB
All DBs
Position
14:join(27727823..27728092,27728372..27728503,27728622..27728834,27728930..27728974,27729078..27729285,27729465..27729655,27729826..27730218)
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AA seq
483 aa
AA seq
DB search
MSGFSLKRLALTILIALLACSSSIQACSARKAMYTRQLKTIGKGYDGYNYQDPKLMDEGN
GVTPLKNTGSSTFNVLHFGAKGDGKADDTKAFEAAWAAACQVRGSTMMVPSGSVFLVKPI
TFSGPNCEPNIVFQLDGKIIAPRSSSAWGSGFYQWLDFSKLQGITIRGKGTIDGQGSIWW
NDSTDESESETPTAGDSLYSSKQDSISGELSAKMPSTKPTALRFYGSSVVTVTGITIQNS
PQTHLKFDDCTGVQVSGVTVSSPGDSPNTDGIHLQNSQNVVIYSTNLACGDDCVSIQTGC
SNIFVHNVNCGPGHGISIGGLGRDNTKACVENVTVRDITMQDTMTGVRIKTWQGGSGSVS
GVMFSNIQVSRVKTPIMIDQFYCDKSRCQNETKAVAVSDINYVNIRGTYTVNPVHFACSA
RLPCSGVTLTPIQLKPAQEVSQSNGPFCWETYGQLKTNTIPPIDCLQRGKPSKNQLHSNG
ESC
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttcagtctcaaaaggctagcactcaccattctcatcgccttgcttgcctgc
tcttcgagctttcaagcatgcagtgctagaaaagctatgtacacccggcagctcaagacc
ataggaaaaggttatgatggttataattatcaggaccccaaattgatggatgaaggaaac
ggagtgactccattgaagaatactggttcttccacctttaatgtcttacactttggtgcc
aaaggtgatgggaaggctgatgacaccaaggcatttgaagcagcatgggcggcagcttgc
caggttcggggatcgacgatgatggttccatctgggtctgtgttcctcgttaaaccgata
actttctcgggccctaactgcgaaccaaacattgtatttcagttggatgggaagatcatt
gctcctagaagctccagtgcttggggatcagggttctatcagtggctcgatttctctaag
cttcaagggattacgatacgtggtaaaggaactatcgatggacaaggctcaatctggtgg
aatgactcgacagatgaatcagaatcagaaactccgactgccggagattcactttatagc
agcaaacaggattcgataagtggtgaactcagtgcaaaaatgccaagcaccaagccaaca
gctctcaggttctatgggagttctgttgtgacagtcactggcatcacaattcaaaacagt
cctcagacccacctcaagtttgatgattgcaccggcgtccaggtttctggcgtgactgtt
tcatcccccggggacagccccaatacggacggaatccacctacagaactcccaaaatgtg
gtgatctatagcacaaatctagcttgtggagacgactgtgtatcaatacagacaggatgc
tcaaatatattcgtacacaatgtgaattgtggacctggtcatggaatcagcattggaggt
ctagggagggataacaccaaagcctgcgtaaaaaatgtcacggttcgagacatcacaatg
caggatacaatgactggtgtcagaatcaagacatggcagggcggttctggctcagtgagt
ggggtcatgttctcaaacattcaagtttctagggtcaaaactcccatcatgatcgatcaa
ttctactgtgacaagagcagatgccagaatgaaacaaaagctgtagctgtatcagacata
aactacgtaaacataaggggtacctacacggtaaaccccgtgcactttgcatgtagcgac
agcttgccatgctcaggtgtgactctgaccaccatacagctaaaaccagcacaagaagtc
tcccaatcgaatggacctttctgttgggagacatatggacagttgaaaaccaacaccatc
cctccaatagactgtttgcagagaggcaaaccatctaaaaaccaactacattccaatggt
gattcatgctga
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