Vitis vinifera (wine grape): 100233127
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Entry
100233127 CDS
T01084
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100233127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100233127
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100233127
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100233127
NCBI-ProteinID:
XP_002269127
UniProt:
F6HQ17
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Position
7:join(2734592..2735046,2736291..2736783,2737251..2738033)
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AA seq
576 aa
AA seq
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MAYSFPEEVLEHVFSFIHTDKDRNAISLVCKSWYEVERWSRRRIFIGNCYAVSPGIVIRR
FPELRSVALKGKPHFADFNLVPDGWGGNVYPWIAAMAMAYPMLEELRLKRMVVTDESLEL
ISRSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDDFSGHWLTHFPDSCT
SLVSLNISCLASEVSFSALERLVGRCPSLRTLRLNRAVPLDRLPNLLRRAPQLVELGTGA
YSAEHRPEVFSSLAGAFSNCKELKSLSGFWDVVPDYLPAVYPACSGITSLNLSYATIQSP
DLIKLVTQCQNLQRLWVLDYIEDSGLDALAASCKDLQELRVFPSEPYDMEGNVALTEQGL
VSVSEGCPKLHSVLYFCRQMTNAALVSIAKNRPNMTRFRLCIIEPRTRDYQTLEPLDVGF
GAIVEHCKELHRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDGDLGLHHVLSGCKSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVMDERGRP
DSRPESCSVEKLYIYRSVAGPRSDMPRFVWTMKTPS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccggaagaggttttggagcatgtgttttctttcattcataccgat
aaggaccgaaacgcgatatctctggtgtgcaaatcgtggtatgaggtggagcggtggagc
cggcgacggatcttcatcgggaactgttacgctgtgagccctgggatagtaatcaggcgc
ttcccggagctccggtcagtggcgctgaaggggaagccgcattttgcagactttaatctg
gtgccggatgggtggggaggtaacgtttatccgtggatcgctgccatggctatggcttac
ccgatgttggaagagttgaggttgaagaggatggtggtgacagacgagagcttggagctg
atctcgcgctcgttcaagaatttcaaggttttggtgctctcgtcgtgcgaggggttcagt
acggatggactcgctgccattgccgcaaattgcaggaatctgagagagctggacttgcga
gagagtgaagtggatgacttcagtggacattggctcacccatttccctgattcttgcaca
tcactggtgtccctcaacatttcctgcttggcctccgaggtgagtttctctgccctggag
cgcctggtgggtaggtgtcccagtctgaggactctccggctcaaccgtgctgtgcccctt
gacaggcttcccaacctattacgcagggcgcctcagctggttgagctgggtacaggtgcc
tactcagctgagcaccggcctgaagtgttctcaagtttagcaggagctttttcaaactgc
aaagagctcaagagtctgtctggattttgggatgtggtcccggattaccttccagccgtt
tatcctgcctgttctgggatcacatctttgaacttgagctatgccactatccaaagtcct
gatctcatcaagctggtcacccagtgtcagaatttgcagcggctatgggtacttgattac
attgaagacagtggcctagatgctctagctgcatcttgcaaagatctgcaagaactgagg
gtgttcccttctgaaccatatgacatggagggaaatgtagccttgacagaacaagggctt
gtctctgtttctgaaggctgccctaagctccactctgtgctatacttctgccgtcaaatg
acaaatgctgccttagtttccattgccaaaaatcggccaaacatgactcgtttccgtctc
tgcattattgaaccccggactcgtgattaccaaaccctggagccacttgatgtgggtttt
ggagccattgttgagcactgtaaagaactacatcgcctttccctctctggtcttctcact
gaccgggtgtttgagtacattggaacccatgccaagaagctagaaatgctatctgtggct
tttgctggagatggtgatttggggctccatcatgttctctctgggtgcaaaagcctccgg
aagttagagatcagggattgtccctttggggacaaggctctcttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagtgagttttggagcatgtaag
ctgttaggtcagaagatgcccagactcaatgttgaggttatggatgaaagggggcgacca
gattcaaggccagaaagctgttcagtggagaagctttacatatatagatcagttgctggg
ccaaggagtgacatgcctcgatttgtgtggacaatgaagactccgagttga
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