Vitis vinifera (wine grape): 100240814
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Entry
100240814 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A isoform X2
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100240814
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100240814
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100240814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-C3HC4_4
zf-C3HC4_3
zf-Nse
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-HC5HC2H
RING_XB3-XBAT31
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
100240814
NCBI-ProteinID:
XP_002281045
UniProt:
D7T6T1
A0ABY9BX71
LinkDB
All DBs
Position
5:complement(join(4756061..4756072,4756623..4756977,4757063..4757170,4757529..4757878,4757945..4758056,4758213..4758275,4758421..4758467,4759461..4759589))
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AA seq
391 aa
AA seq
DB search
MADLTSSENPIFLSEFSAGAADDASEDSCSICLEPFSTDDPATITNCRHEYHLQCILEWS
QRSKECPICWQFLVLQDPTSQELLAAVEGERSPRSRNSSPTESTFLHHFQGDFGYDHDAS
YSDDSDLDEHIMQHVVAAASGAPYVHRRERQRSSGLGPSESLVFPPTDVPDVQTINTPSP
EEYQNSGSVSSESNSPAHSDQSAINAQPLSSGVPSVVNMVSSTAANRDGLAKPRVIFDQP
LPSSPRRPSPSDLLSFSDSIKSRLSAASARYKESISKGTRGFKEKLLSRNNSVKELSKGV
QREMSAGIASVTRMIERLDPILKRTGASNPDSSFTGGTSNVSHKGKGVQENVITPSGNNG
EISNDSSPDASPLASVTISDRVEVFPLQSGQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttaacttcttctgaaaatccgatcttcctgtcggagttctccgccggagct
gccgatgacgcttccgaggattcttgtagtatttgtctcgagccgttcagcaccgacgat
cctgctactattaccaactgcaggcatgaatatcatcttcagtgtattcttgaatggtca
caaagaagcaaagaatgcccaatttgctggcagtttcttgtcttgcaagaccctaccagc
caggagctacttgctgcagtggagggtgaaaggagcccaaggtcaaggaactcatccccc
acagaatccacatttcttcatcatttccagggagattttggttatgatcatgatgcttct
tactcagatgactccgatctcgatgagcatattatgcagcatgtagttgctgcagcaagt
ggagccccttatgtacacagaagggaaaggcagagatcttctggtcttggtccttctgaa
agtcttgtttttcctcctacagatgtgcctgatgtgcagacaataaacactccgtcacca
gaagaatatcaaaattcaggcagtgtgtcatctgaaagcaattccccagcccacagcgat
caatctgctatcaatgctcaacctctgtcatcaggggttccctctgttgtgaatatggtg
tctagcacagctgccaacagagatggtctagctaaacccagagttatttttgaccagcca
ctgcctagtagtccgaggagaccaagcccatctgatttgctttctttttctgactcaatt
aaatctagactttcggctgcttcagcaagatacaaggaatcaatctcaaaaggtacacga
ggtttcaaggaaaaactactttcacgtaataactcagtcaaggagctgagcaaaggagtt
cagcgtgagatgagtgcaggtattgctagtgttacaaggatgattgagcgcctagatcct
atcttaaaacgcactggagcatctaatcctgattccagctttactgggggaacctcaaat
gtctctcataaggggaagggtgtgcaagaaaatgtgatcactcctagtggaaataatggg
gaaatctcaaatgattcgagtcctgatgcatcacctcttgcttcggttaccatctcagac
cgagttgaagtttttcctttgcagagcggacaatga
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