Vitis vinifera (wine grape): 100240849
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Entry
100240849 CDS
T01084
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100240849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100240849
03036 Chromosome and associated proteins [BR:
vvi03036
]
100240849
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
100240849
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
100240849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
eIF2A
Ge1_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_VPS8
CFAP43_N
RMC1_N
PEP5_VPS11_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
100240849
NCBI-ProteinID:
XP_010662147
UniProt:
D7T7U4
LinkDB
All DBs
Position
16:join(2714410..2714505,2715472..2715744,2715907..2716176,2716262..2716843,2717204..2717338)
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AA seq
451 aa
AA seq
DB search
MDAGSLSSLNCNSTYKCPLQEQFHRRRKTRENLDRFIPNRSAMDFDYAHYMLTKGRKGKE
NPSVLSPSIEAYLKLLANTFHMNRGRILAFKNKPPTPVELTPREFLSPVRQFKPSKPKQH
IPQTPERTLDAPDIIDDYYLNLLDWGSSNILAIGLGSTVHFWDGSNGSTSELVTVDDENG
PVTSISWAADGQHIAIGLNNSDVQLWDSTANQLLRTLRGGHQSRVGSLAWNNHILTTGGR
DGKIINNDVRVRSHIVETYRGHHQEVCGLKWSASGQQLASGGNDNMLYIWDRSMSSSNSR
SQWLHRLEDHTAAVKALAWCPFQSNLLASGGGGNDLCIRFWNTHTGACLNTVDTGSQVCA
LLWNKKERELLSSHGFSQNQLTLWKYPSMVKITELTGHTSRVLFMAQSPDGCTVVTAAGD
ETLKFWNVFGTTPEVKNAAPKELFPHFSRIR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggtctttgagctccttgaactgtaacagcacgtataaatgccctctccag
gagcagtttcatcggagaaggaagaccagggagaatttggacagattcattcccaaccga
tcagccatggacttcgactatgctcattacatgctgaccaaagggaggaaaggcaaagag
aacccaagtgttctcagcccatccattgaggcttatttgaagctcttggctaataccttc
catatgaacagaggccgcatcctcgcctttaagaacaaaccaccgactccagtagagctg
acaccacgtgaattcttgtctcctgttcgccaattcaagccctcaaagcctaaacagcat
attccccagactcctgagaggacattggatgctcctgatattatagatgattattactta
aacttattggactggggtagcagcaacattcttgcaattggtcttggaagcacggtacat
ttttgggatggttcaaatggttctacctcagagcttgttactgttgatgatgagaatggc
cctgttacaagcatcagttgggctgctgatggacaacatattgccattggcttgaacaac
tctgatgttcagctatgggattctacagctaatcaactgctgaggactctgagaggtggc
caccaatctcgagtcggttctctagcttggaacaaccacatccttacaactggaggaagg
gatggtaagatcattaacaacgatgtgagagtgcgatcacacattgtggaaacttataga
ggacaccatcaagaggtttgtggattgaaatggtctgcctcaggccagcagctagcaagt
ggagggaacgacaacatgctctacatatgggacaggtccatgtcctcttcgaattcacgt
tctcagtggcttcataggcttgaagaccacactgctgcagtgaaagcccttgcttggtgc
cctttccagagcaatttgttggcctctggtggaggtggaaacgacctatgcataaggttt
tggaacacccatacgggtgcatgcttgaacacagtggacacaggctcacaggtctgtgct
ctgctgtggaacaaaaaggagagggagctgcttagttcccatggcttttcacagaatcaa
cttactctgtggaagtacccatcaatggtgaagattactgagcttactggtcatacatcc
agagttcttttcatggctcagagcccagatggatgcacagtggtaactgctgcaggagat
gagacactcaaattttggaatgtcttcggcaccaccccagaagtgaaaaatgctgcacca
aaagagctgtttccacatttcagtcgaatccgttag
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