KEGG T01084: 100241398

Vitis vinifera (wine grape): 100241398

Entry

100241398         CDS       T01084

Name

(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2

K08775

breast cancer 2 susceptibility protein

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi03440

Homologous recombination

vvi03460

Fanconi anemia pathway

Brite

KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100241398
   03460 Fanconi anemia pathway
    100241398
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100241398
   03036 Chromosome and associated proteins [BR:vvi03036]
    100241398
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100241398
Ubiquitin system [BR:vvi04121]
Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    100241398
Chromosome and associated proteins [BR:vvi03036]
Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     100241398
DNA repair and recombination proteins [BR:vvi03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     100241398
   FA (Fanconi anemia) pathway
    Downstream FA components
     100241398

SSDB

Motif

Pfam:

BRCA-2_OB1 BRCA2 BRCA-2_helical Rieske_2

Other DBs

NCBI-GeneID:

100241398

NCBI-ProteinID:

XP_010653390

LinkDB

Position

8:complement(join(10704204..10704260,10704356..10704523,10705657..10705864,10705962..10706024,10706092..10706234,10706436..10706618,10706695..10706893,10709997..10710068,10710148..10710259,10710387..10710462,10711002..10711052,10711148..10711229,10711301..10711498,10711577..10711699,10712740..10712894,10712986..10713110,10713197..10714207,10721286..10721432,10721741..10721903))

AA seq 1111 aa
MSTWQIFSDSDNDFRWEISDAQSLTKPVEEASGAPIQPYDSTSRLPSMVDLLLQGCSKIL
ENDGPCVESPPMFRTGLGKSVTVKQSSIAKALSVLGDDDFGAGGQDHDRDNGCGFSNSLF
QTGSGKMVNISSAGLVRAKTLLGLEENSNHHSCQEHITKQSVMDGLDGGQNSSCLEMQED
LNSIKSEDAKPVPRPFSTSTSWRTESINEAVPHLKQSEMYNPAPNPPPIKFHTAGGRSIS
VSSDALQRARSLLGDPELGTSLNEGDEDDMISSFLKGSFRDASSDKENDSDTSLSHHEKA
KSKHTSKSFISPIRLFPNRVQSSVMPENTYSGSNLIKKYADDSKITCPQEPLSNRLCAPH
TIIDNSVANGNCSINKPLGRSSGGPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFK
RPRSSKFCPPLNSNVSFVPNGLSTLASEDTCCRKRVSTRYPFHAPRMYIKEYFGVLPFNK
NVLEHLSDEVRWMNPDNAEKYMFPDEYGLGFIGVDDLYQRLAQSGASMQYASKEWIANHY
KWIIWKLACYERFYPAKHMGRFLTMSNVLEELKYRYEREVNHGHRSAIKRILEGDASPST
MVVLCVSAIHSTCDMKIGTHSVSINGSENSNAAKVELTDGWYSIDAFLDALLSKQLFAGK
LFIGQKLRIWGAGLCGWVGPVSPLETSKTAGLLVHINGTYRAHWADRLGFCKGVGPPLAF
RCIKSNGGPVPQTLVRVTRIYPILYKERLSNGGSIVRSVRMETKMMQLYNHRCSTVVEGI
ISEFQRGTRDSCINNDNDSEEGAKIFEILESAAEPEVLMAEMTSEQLASFTSYQAKLEAI
RQSDLQKSIEMALEGAGLSTREVTPFMRVRVVGLTCKSYEGKIHHKEGLITIWNPTEKQQ
FELVEGQAYAVAGLMPLNSDSETLYLQARGSTTKWNPLSPLAIEHFEPFLNPRKSVLLSN
LGEIPLSSEFDIAALVVYVGEVYTAAHQKKQWVFVTDGSVSELGSEEASNCLLAISFCSP
SVDDSFAPVNSNLEGSTVGFVNLIKRAKDQMNQLWVAEATENSDYFFSFDLPHCYHLKNA
AASAERWAKISSLTIEKLKEKVLFIIGDCKG

NT seq 3336 nt +upstreamnt +downstreamnt
atgtcgacatggcagattttctccgactccgacaacgatttccggtgggagatttcagat
gcacagagcttaaccaaacccgtagaagaagcaagcggtgctccgatccaaccatacgat
tccacttctcgtctcccgtccatggtggatctgttgcttcaaggatgttcgaagattctg
gagaatgacggtccctgtgttgagagccctccaatgttccggactggattaggaaaatca
gttacagtaaaacagtcttcaatagcaaaagcgttatctgttcttggtgatgacgatttc
ggtgctggaggccaagatcatgatagagataacggatgtggtttctcgaattctcttttc
cagactggctcagggaaaatggtcaatatttcttctgctggtctggtcagagccaagaca
ttgttggggttagaagaaaatagcaaccaccattcttgtcaagaacacatcacaaagcag
agtgtgatggatggcttagatggtggacaaaattcatcttgtttagagatgcaagaagat
ttgaacagtataaaaagcgaggatgctaaaccagttccaagaccttttagtactagcact
tcttggagaacagaatcaataaatgaggctgttccccaccttaagcagtctgaaatgtat
aatcctgcaccaaatccaccaccaatcaagtttcatactgcaggtggaaggtcgatatca
gtttctagtgatgcattgcaaagagcaaggagcctccttggtgacccagaattaggaact
tcattaaatgaaggggatgaagatgatatgatttcttcctttttgaaagggagtttccgg
gatgcttcttcagacaaagaaaatgattctgatacttctctttcccatcatgaaaaggca
aaaagtaaacatacatcaaaaagtttcatatctcccatccgtttgtttcctaaccgggtg
cagtcatcagtcatgccagagaatacatattcagggagtaacttgatcaagaaatatgca
gatgacagtaaaataacttgtccacaggagcctttaagcaacaggctctgtgcacctcat
acaataatagacaattctgtggcaaatggtaattgttcaataaataagccattaggaagg
tcatcagggggcccactagttgatgtttcgaatagaattggcacattgttaaccaacaag
aaacaaactattaccgaaaaaaggagacttggtagaagaagttctatctctccattcaag
cggccacgcagttccaagttctgcccccctttgaatagcaatgtgtcttttgttcccaat
ggcttatctactcttgcatctgaagatacctgttgcagaaaaagagtttccactcgatat
ccgtttcatgctcctagaatgtacatcaaggaatactttggagttcttcctttcaataag
aatgtgttggagcatttgtcagatgaggtaagatggatgaatccagacaatgcggaaaag
tatatgttccccgatgaatatggtttaggcttcattggggtagacgatttataccagaga
ctggctcagtctggagcttccatgcaatatgcttctaaagagtggattgctaatcattac
aagtggatcatttggaaacttgcttgttatgagagattctatccagctaaacatatggga
agatttttgacaatgtctaacgtgcttgaggaattaaaatatagatatgagagagaagta
aatcatggccaccgttctgcaattaagagaatcctggaaggagatgcatcgccttctaca
atggtggtgctatgcgtttctgccattcattcaacctgtgacatgaagattgggactcac
tctgtgtcaataaatggttctgaaaatagtaatgctgcaaaagtggagctaactgatggg
tggtattcaatagatgcttttttggatgcattgctgtcaaagcaactttttgctggaaaa
ttgttcataggacagaaacttcggatctggggagcaggattatgtggctgggttgggcct
gtttcaccccttgagacatcaaagacagctggtttgttggtgcacataaatgggacgtat
agagctcattgggctgatcgactgggattttgtaagggtgttggtcctcccttggcattt
cgatgtatcaagagtaatggtgggccagttcctcagactttagttcgagtcacacggata
taccctattctctacaaggaaaggttaagtaatgggggctctatcgtcagatctgtaagg
atggagaccaaaatgatgcaactgtacaaccataggtgctctactgtagtagagggtatt
atctccgagtttcagaggggcactcgagattcctgtattaataatgacaatgatagtgaa
gaaggggcaaaaatatttgagatacttgagagtgctgctgaaccagaagtcttaatggca
gagatgacctcggagcagcttgcttcattcaccagttatcaagcaaaactagaggcaatc
aggcagtcggacctgcagaaatcaattgagatggctctggaaggtgctggcctgagcaca
agagaggtcactccatttatgagggtgagggtggttgggttaacttgtaaaagttatgaa
ggaaaaatccatcataaagaaggcttgataactatttggaacccaacagagaaacagcaa
tttgagctggttgaggggcaggcatatgcagtagctggactgatgccacttaactctgat
tcagagaccctttacttacaagcaagaggatctactaccaaatggaatcctttatctccc
ttggcaattgaacattttgagccattcttgaatccacgaaaatcagttttattgtcaaat
ttgggtgaaattcctctgtccagtgaatttgatatcgctgcattggttgtatacgtcggt
gaggtttatacagctgctcaccaaaagaagcagtgggtatttgtaacagatggctctgta
tctgagttagggtctgaagaagcatctaattgtttgcttgccatcagcttctgctcacca
tctgtagatgattcatttgcgccggtcaactctaaccttgagggatccacagttggcttc
gtcaatctcattaagagagcaaaggatcaaatgaatcaactctgggtagcagaagcgact
gaaaattcagactatttttttagttttgacctgccacactgttatcacctcaagaatgct
gctgcctctgctgaaagatgggcaaaaatatctagcttgacaattgagaagctcaaggag
aaggtcttatttattattggtgattgtaaaggctag

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