| Entry |
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| Name |
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
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| KO |
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| Organism |
vvi Vitis vinifera (wine grape)
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| Pathway |
| vvi04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100241573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:vvi04121]
100241573
Enzymes [BR:vvi01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
100241573
Ubiquitin system [BR:vvi04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100241573
Multi subunit type E3
ERAD complex
100241573
LMBR1L-GP78-UBAC2 complex
100241573
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
16:complement(join(16749274..16749330,16751196..16751577,16753423..16753653,16753749..16753816,16753910..16754047,16754191..16754348,16755817..16755922,16756043..16756139,16757664..16757785,16757873..16757959,16760581..16760658,16763315..16763554))
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| AA seq |
587 aa
MGASYLLVSAACTVFSFVGLQWWTEQSLHRLKSDGLISDNYIHSGNASRVLDLLLSSHAT
IALLVNFALNIFVLLILCLKTIFFAELYPSETRKLVGRLINYVIYKGTFLPLVVPSTIFQ
AGLWSMWLTILCSLKMFQALARDRLERLNASPSATPWTYFRVFSVLLLVLSVDLFWIWLC
LVIYRTLSSPMFLLLFFEPWSIAFETLQAIVVHGFQLIDIWLHDSEGNSINCRGSKIFHI
SPVGSLLEWKGILIRNLGFLLDMATLLMALGHYLHIWWLHGMAFHLVDAILFLNIRALLS
AIVKRVKGFIKLRMALGTLHAALPDATSEELQAYDDECAICREPMAKAKKLHCNHLFHLA
CLRSWLDQGLTEIYSCPTCRKPLFTGRSRDDANPRTGEVSSDEQLARQISSGLDRPGPAA
HALPAGVFPNQTHDALEISAWREAGLDPSWLHTWPNQGLDGAGPSTAIRSVGLGRVQMMM
RHLASVGETYAQTALEDAAWSLWPMNPSQAAASGLPIPPAAAVRYPGGNGGLHMRTASRS
ANDNLANILAMAETVREVLPHIPDEIIFQDLQQTNSATVTVNNLLQM |
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| NT seq |
1764 nt +upstreamnt +downstreamnt
atgggtgcgagttacttattggtctctgcggcctgcacggtattcagctttgtgggtctg
caatggtggacagagcaatcgttacacagactaaagtctgatgggttaatcagtgataac
tatatccactccgggaatgcaagccgtgtgctagatctgcttttgagttctcatgcaaca
attgctttgctggtcaattttgcgctcaatatatttgtcctgctcatattgtgtcttaag
actatattctttgcagagttgtatccttctgaaactcgaaagttagtggggcggcttatc
aattatgttatttacaagggaacatttcttcctctggttgtcccatcaacaatatttcaa
gcaggcctgtggtcaatgtggctgactattctttgttctttaaagatgtttcaagcttta
gctagagatcgacttgaacgtttgaatgcatctccatctgctacaccatggacatatttt
cgtgtgttttcagtactattgttggtcctgtctgttgatttgttctggatatggctgtgt
ctggtgatatatagaacgttaagttcacctatgttcctgttgttgttttttgagccttgg
agtattgcttttgagacactacaggctattgtggttcatggatttcagttgattgatata
tggctccatgattcagaagggaacagcataaattgccggggatccaaaatttttcatata
tcaccagtaggttcattgttggaatggaaaggcattcttatccggaacttgggttttctc
ttagacatggcaactttgttaatggctcttggtcattacttacatatttggtggcttcat
ggcatggcattccatcttgtagatgctatcctttttctaaatatacgtgccttgctgagc
gcaattgtaaagcgtgtcaagggattcattaaattgaggatggctttaggtaccctgcat
gcggcacttccagatgcaacatctgaagagctacaagcatatgatgatgaatgcgcaatc
tgtagggaaccaatggctaaggctaaaaaactgcattgcaatcaccttttccatcttgca
tgcttgagatcttggttggatcaaggtctgacagagatttattcatgccccacatgtcga
aagccacttttcacaggcagatccagggatgatgctaacccccgcactggagaagtatca
agtgatgagcagttggcccgtcaaataagttcaggacttgatcgaccaggtcctgctgca
catgcattacctgcaggagtcttccccaatcagacacatgatgctttagaaatcagtgct
tggagagaagcaggactggatccaagttggttgcatacttggccgaaccagggtcttgat
ggagctggtccatctactgctatcagatcggttggattgggtagagttcagatgatgatg
aggcatcttgcatctgttggagaaacgtatgcccagactgctcttgaagatgctgcttgg
agcctttggcctatgaatccttctcaggctgccgcatctggtttgcccattcctcctgct
gctgctgtaagatacccaggaggcaatggtggtttacatatgaggactgcctcacggtct
gccaatgacaacctagcaaatatattagccatggcagagacagtaagagaagtgctgccc
cacatcccagacgagattattttccaggacttgcagcaaacaaattctgcaactgtcact
gtgaataatcttctccaaatgtga |
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