Vitis vinifera (wine grape): 100241925
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Entry
100241925 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100241925
KO
K14801
pre-rRNA-processing protein TSR4
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
100241925
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100241925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
FtrD-like
Motif
Other DBs
NCBI-GeneID:
100241925
NCBI-ProteinID:
XP_002269082
UniProt:
F6HZ73
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All DBs
Position
7:complement(join(3880810..3880953,3881155..3881269,3881511..3881581,3881662..3881816,3883010..3883124,3883212..3883300,3884368..3884465,3884582..3884715,3885118..3885201,3885298..3885546))
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AA seq
417 aa
AA seq
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MPDEAEMDLDGHSVEEQLKAFQISSLKDEDLDEEEGEAADSNSDVVDDDDCEAEPVTLGF
VEKPKNGWSLLCHMFPSKAGGLPAWLDPINLPSGKSSLCDICQTPLQFLLQVYAPISEKE
STFHRSLFVFMCTSMECILQDKREQWKCPPEKASRSVKVFRCQLPRSNPFYSSEPPRGDG
TDKPSGIGARLCNWCGTWNGDKVCSSCRKAHYCSEKHQVMHWRSGHKFVCRQMKTSSESS
NSIPVNNRTTSNKLEKVASNTLWSEYEIINEDECEFDIEMSEDNGYSSSLVSNDRSDETF
KALLKHFEADDDKKSWTSFQECIGKAPEQVLRYCRSPRAKPVWPISSGRPSQVDAPKCRY
CGGPSVFEFQILPQLLYYFGVKDDVDCLDWSTIAVYTCEASCEASLSYKEEFAWIQV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgaagcggaaatggatctggatggacactccgtggaagaacagctcaaagct
ttccaaatatcatcccttaaagacgaagacctagatgaagaagaaggggaagccgcggac
tccaactctgatgtcgtcgacgatgacgactgtgaagcagaaccagtgacgctagggttt
gtagaaaagcctaagaatggctggtcccttctctgccatatgtttcctagcaaagctgga
ggcctgcctgcatggttggatcccattaatttgccttcaggaaaatcttccctttgcgat
atctgtcaaacgcctttacaatttttgcttcaggtttatgcaccaatctctgaaaaggaa
tccacatttcatcggtctttatttgtgttcatgtgtacatcaatggaatgtattctccaa
gacaaacgtgagcaatggaaatgcccaccagagaaggcatctcgaagtgttaaggttttc
cgttgccaattacctcgctccaatcctttttactcaagtgagcctccaaggggcgatggg
actgacaaaccttctggaattggagcacgactctgtaattggtgtggtacttggaatggt
gataaggtttgcagtagctgcagaaaagctcactattgctcagagaaacaccaggttatg
cattggcgctcaggacataagtttgtttgtcgacaaatgaaaacttcctctgagtcatct
aactctatcccagtaaacaacagaaccacttcaaacaagctagaaaaagttgcaagtaac
actctgtggtcagaatatgagatcataaatgaggatgaatgtgaatttgacatagagatg
tctgaagataatggatacagcagttctttggtttcaaatgaccgaagtgatgaaacattc
aaggcactgttgaagcattttgaggcggatgatgacaagaagagttggacctctttccaa
gagtgcataggcaaggcccctgagcaagtattgagatattgtaggagtccaagggccaaa
cctgtgtggcccatttcaagtggtcggccatctcaggttgatgcacctaaatgccgctac
tgcggtggtccttcggtttttgaattccagatcttgccacaacttctttattactttggt
gtgaaggatgatgtggattgtcttgattggtccactattgcggtttacacgtgtgaagct
tcatgtgaggcaagcttgagttacaaagaggaatttgcttggattcaagtctga
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