Vitis vinifera (wine grape): 100242129
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Entry
100242129 CDS
T01084
Name
(RefSeq) protein STICHEL
Organism
vvi
Vitis vinifera (wine grape)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RCF1-5-like_lid
AAA_22
AAA_16
RuvB_N
Motif
Other DBs
NCBI-GeneID:
100242129
NCBI-ProteinID:
XP_002268959
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Position
12:complement(join(24270779..24270886,24270985..24271066,24271676..24272480,24273768..24274331,24277658..24277877,24278265..24280319))
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AA seq
1277 aa
AA seq
DB search
MSEMVVMDPSNFHLQKKQLTQIRKAARVLRDPGTTSSWRSPLSTARSLSLSAATPPPPQP
PPPPPRPPEESRRVFLYNWRSASQKAKSSVNGENEDDEDGVDGSSVDDSLSDWRNGVDSK
SDTYIGGRRHRRHHASMIFRCRDANLVAMGRPSGIKKKKGSKNVHSIALLRHQQQQQQLN
TARSGNSKRLLEGILGRDDSVEQSDDTEEYYNSEDFRRICEASPLLSRLRQRNWSRSSSR
LLRSKRKDDSSYSYSTPALSTSSYNPYGNRNPSTVESWDGTTASLHDGDDEVDDQLDLPG
RQGCGIPCYWSRRSTPRHRGICGSGSCDSPSLSDTIRRKGSSMLCGSQTIYPRRHGLPLG
SKKRRSVSMTPQGLLPLLTNSCDGHGGSSMGTGRSDDELSTNFGELDLEALSRLDGRRWS
SSCRSQEAMELVALNGEREEEGSPENVRSLSQKYRPMFFDELIGQNIVVQSLVNAISRGR
IAPVYLFQGPRGTGKTSTARIFTAALNCLAVGETKPCGICRECSDFISGKSRHFREIDGT
NKKGMDRMRYLLKTMPFGTPSPLSPYKVFVIDECHLLPSKTWLAFLKFLEEPPPQVVFIF
ITPDLENVPRTVLSRCQKYLFNKIKEGDIVARLRKISDDENLDVESDALELIALNADGSL
RDAETMLDQLSLLGKRITTSLVNDLVGVVSDEKLLELLELAMSSDTAETVKRARELMDSG
VDPIVLMSQLASLIMDIIAGTYHIVDAQQSDSFFGGRSLTEAEMDRLKHALKLLSEAEKQ
LRVSSERSTWFTATLLQLGSPSPDPTLSGSSRRQSSKTTEDDPSSASRDATIVHKQKPNA
HHMPRKSFSPISMPKSAEKNSTHQGDLLSLVDGFNFNAKPVHSQFRNSGASASSHDDVMM
GNLVFRSINADKLDDIWERCIERCHSKTLRQLLHAHGKLVSISEAEGGLVAYVAFQDEDI
KCRAERFLSSITNSIEIVMRSNVEVKIILLPDGEISMNMKAVGLPDTLGLKQRETTAAVE
GERKAFSMKGIDSDLDSSHQELLKVSRGSFNDSEGKLRGGSRDPSNCSPLLDRTFGPTDE
LAEGHIERSSTKERNQEIPMHRIDSIIREQRLETAWLQVAEKGTPRSMSRLKPEKNQILP
QDGTYRQNQVESMNSVGVPSQKWEDELNHEIKVLKINDRRALQKDPVGKRVDHYPISPSS
LHDSSFVANFNKESMGYESGTGSVGCNSFFCWNNDKPPKRGKIKQRPPLPSPKVGRGRFP
CFGECGKSRKTDSRFKT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatggttgtgatggatcccagcaacttccacttgcagaagaagcagctcact
caaattcgcaaggcagctcgggtcttgcgagatccaggaaccacgtcttcctggcggtct
ccgctcagcaccgccagatctctatccctctccgctgcgacgcccccgccacctcagccg
ccgcctccaccgccccggccgccggaggagtcgaggagagtgtttctatacaattggagg
agtgctagtcagaaggcgaaatcgtcggtgaacggtgagaacgaggacgatgaagacggc
gttgatggatcgagcgtggatgacagcttgagcgattggcggaatggcgtggattccaag
agcgacacctacattggcggccggcggcaccggcggcaccacgcttcgatgatcttcaga
tgcagagatgcgaatctggtggcaatgggcagacctagtgggattaagaagaaaaagggc
agcaagaatgtacactccattgctttgttgagacaccagcagcagcagcagcagctcaac
actgctcgctccggcaattcgaagcgattgctggaggggattttaggccgggacgactca
gtggagcagtcggatgacactgaagagtactacaattccgaggatttccggagaatttgc
gaggcctctccattgctgtcaaggctgaggcaaaggaattggtctcggtcctcatctaga
ttgctgaggagcaaacgaaaagatgactcttcttattcgtacagtacgcctgcattgtcc
actagctcttataatccgtatggcaatcgaaaccccagtactgttgagtcctgggatggg
actacagcctccctacacgatggggatgatgaggtagatgatcagttggatttgccgggc
cggcagggatgtgggattccttgttactggtctaggaggtcaacaccaagacacagaggg
atatgtgggagtgggagctgtgactccccttcgctttctgatactataaggagaaaagga
agtagcatgttgtgtgggagtcagaccatataccccaggcgccatgggctgccgttgggt
tccaagaagaggagaagtgtttcaatgactcctcagggtctgctcccattgctgaccaac
agttgtgatggccatggagggtcatctatgggaactgggcgaagtgatgatgagctttct
acaaattttggggagctagatttagaggccttgagtaggttggatgggaggaggtggtct
tcgagttgtaggagtcaagaggctatggagcttgtggctctaaatggggagagggaagag
gaaggtagccctgaaaatgttaggagcttgagtcagaaatataggccaatgttctttgat
gaattgattggtcagaatattgttgttcagtcccttgtcaatgccatttccaggggaagg
attgcccctgtatatcttttccagggtccccgtgggacagggaaaacatccacagctagg
attttcactgctgctttgaattgtttggcagttggagaaactaagccatgtgggatctgc
agggaatgcagtgacttcatatctggaaagagcaggcattttagggaaattgatggcacc
aataagaagggaatggacagaatgaggtaccttttgaaaaccatgccatttggaactcca
tcgcctctttcaccatacaaggtttttgttattgatgagtgccatttattgccctctaag
acttggcttgcttttctcaaatttcttgaggaaccgccaccacaagttgtgttcatattc
ataacacctgatcttgaaaacgtgcctcgtactgtactttcacggtgtcagaaatacctt
ttcaacaaaatcaaagaaggtgatattgttgccaggttgaggaaaatttctgatgacgag
aatctggatgttgaatcagatgcattggagttgattgccttaaatgctgatggttccctt
cgagatgcagaaactatgttagaccaattgagtttgctggggaagagaatcactacgtct
cttgtaaatgaccttgtgggtgttgtttcagatgagaaactactggaacttttggagtta
gccatgtcatcagacactgcagaaacagtgaaaagagccagagagctaatggactctgga
gttgatccaatagttttgatgtctcaattggccagccttattatggatatcattgctgga
acatatcacattgttgatgcccaacaaagcgattcattctttgggggacgaagtctgaca
gaggcagaaatggatagattaaagcatgccttgaagcttctctcagaggctgagaaacaa
ctaagggtttcaagtgaacgttcaacatggtttacggcaactctcttacagcttggttcc
ccttcacctgatcctactctgtctggcagcagtaggaggcagagctcaaagacaactgag
gatgatccatcaagtgcttctagagatgctactattgttcacaagcagaagcctaatgct
caccatatgcctcggaaatcattttctcctatttccatgcctaaatcggctgaaaaaaat
tccacccatcagggggatttattgtccctagttgatggttttaatttcaatgccaagcct
gtgcacagtcaatttaggaatagtggtgcctctgcttcctcacatgatgatgttatgatg
gggaatctggtctttagaagcattaatgcagataagttggatgatatctgggagcggtgt
attgagaggtgccattcaaagacactgaggcagctgctacacgctcatggaaagcttgta
tcaatctctgaagctgaaggtggtctggttgcttatgttgcatttcaggatgaagatatt
aaatgtagagctgagaggtttctgagtagtatcacaaactcaattgagatagttatgaga
agtaatgtagaagttaaaataatcctcttgccagatggtgaaatttctatgaatatgaaa
gcagttgggttgccagatactttgggcctgaagcaaagggaaacaactgcagcagtcgaa
ggggaaagaaaagcattcagcatgaaaggaatagattcagatctagactcctcacatcag
gagctgcttaaagtatccagaggaagctttaatgattctgaaggtaagctgagaggtgga
tcacgagatccttctaattgttctccactgctagatagaacatttggacctacagatgaa
ttggctgaagggcacattgaaagaagtagtacaaaagagaggaatcaggagattccaatg
cataggattgactccataattcgcgaacagagattagaaactgcatggttgcaggttgca
gagaaaggcacacctaggtcgatgagtcggttgaaacctgagaagaatcaaatcctgccc
caagatggtacctatcgtcaaaatcaagttgaatccatgaattcagtaggtgtgccctct
cagaaatgggaagatgaactaaaccatgaaatcaaagttttgaagatcaatgatagaagg
gcccttcagaaggacccagttggtaaaagagtcgatcattatcccatatctccaagctca
cttcatgatagcagctttgtggccaatttcaacaaagaaagcatgggatatgaatcaggg
actggaagtgtaggttgcaacagctttttctgttggaataacgacaaacctcctaaaagg
ggaaagattaaacaacggcctccccttccatcacccaaagttggacgaggacgattccca
tgctttggtgagtgtgggaaatcaaggaagacagacagcagattcaaaacataa
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