KEGG   Vitis vinifera (wine grape): 100242137
Entry
100242137         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100242137 isoform X1
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100242137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100242137
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100242137
SSDB
Motif
Pfam: TPR_Vps8 Beta-prop_VPS8 VPS8_N TPR_Vps41 Clathrin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_EML WD40 WDR55 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR3_1st TPR_VPS8_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_Aladin WD40_Prp19 zf_RING_Vps8 zf-RING_Vps41 Beta-prop_THOC3 Beta-prop_HPS5 zf-RING_2
Other DBs
NCBI-GeneID: 100242137
NCBI-ProteinID: XP_002267626
UniProt: F6I2Y1 A0ABY9DDF1
LinkDB
Position
15:complement(join(19737284..19737309,19737391..19737631,19737710..19738123,19738602..19738935,19744889..19744998,19745094..19745369,19746388..19746694,19746820..19747010,19747722..19748383,19750078..19750133,19752014..19752156,19752288..19752389,19752471..19752535,19753450..19754083,19754226..19754383,19754456..19754579,19754700..19754939,19755015..19755326,19755632..19757203))
AA seq 1988 aa
MTKKLSAPPMELDLDSFIHLTSDDDDDDALNRVPHRTVDEILNDSDSSSSSLSPSDHSYL
AKHSSLFEDANDSRDDVVSVSTPKTLSDERPKSAESLKFNEIEDRLVQFKANSLSRVRTG
DLSGDSFSLGRRVSRPLPPLFGSVRSNAKPGAALAAAAAASRPVPTPHAAAIKSRRAGSG
ALQRVLDTEELGGSGLDKLGSSSDVLNGAGSEIASSDWKSGEEDDKFEDFQSATIEWTVK
ADVDDKVSVKDEIVESSHRDGEVFDLEKVPTEVVHTLEEDESRVNDSDEILLNSSAETGL
AASLSIEEESFDLNEGSAISGSYDVKDQNIASDNVEETASNSTFLDAANSADKDEKVRED
LTLKTQDLEPVEPPSTDGEVNIAGDDWSPKSDVTELVEERLGQLESKMGSKRTEKKPRLK
PLELAEELEKSQASTGLHWEEGAAAQPMRLEGVRRGSTTLGYFEIDNNNTITRTISSPAF
KRDHGSPQVLAVHLNFIAVGMSRGVVMVVPSKYSAYNADNMDAKILMLGLQGERSHAPVT
SMCFNHQGDLLLAGYGDGHITVWDVQRATAAKVITGEHSAPVIHTLFLGQDSQVTRQFKA
VTGDSKGLVLLHAFSVVPLLNRFSIKTQCLLDGQRTGTVLSASPLLLDESSGSSLMSSQG
NATGSTSSIGSMMGGVVGGDAGWKLFSEGSSLVEEGVVIFVTHQTALVVRLSPSLEVYAQ
LNKPDGVREGSMPYTAWKCMTIHSRGLSTENTPVEASERVSLLAIAWDRKVQVAKLVKSE
LKIYGKWTLESTAIGVAWLDDQILVVLTSTGQLCLFAKDGTVIHQTSFAVDGSGGDDPVA
YHTYFTNIFGNPEKAYQNSIAVRGASIYILGPVHLVVSRLLTWKERIQVLRKAGDWMGAL
NMAMTLYDGNSHGVIDLPRSLEAVQEAIMPYLVELLLSYVDEVFSYISVAFCNQIGKMEQ
LDDPKNRGSSVHFEIKEQFTRVGGVAVEFCVHIKRTDILFDEIFSKFVGVQHRDTFLELL
EPYILKDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLY
GALIYLFNRGLDDFKAPLEELLVVLLNRPRESASSLGYRMLVYLKYCFSGLAFPPGHGTL
PPTRLPSLRTELVQFLLEDLNALNSQAVSSLSSTRALPNLYHLLELDTEATLDVLRYAFV
EDEITKPDVSLHDSTDANMEAGKEIDLMGEIQNLLVQNTVNALIHILDISQKNRSSGSSD
IGSLELWPSKKDMGHLFEFVAYYVACKRANVSKTVLSQILEYLTSENKLPQSSSKESVGT
LKRREKQVLALLEVVPEKDWDASYVLHLCEKAEFYQVCGLIHSIRHQYLTALDSYMKDVD
EPVHAFSFINHTLSQLSDTESAAFRSAVISRIPELVNLSREGTFFLIIDHFNKESPHILS
ELRSHPKSLFLYLKTVIEVHLSGTLNFSCLQNDDTMDASCGRRVKNQLYGLEAYLERILD
FPKLLLNNPVHVTDEMIELYLELLCQYEHTSVLKFLETFESYRVEHCLRLCQEYGIIDAA
AFLLERVGDVGSALLLTLSGLNDKFNVLETAVGSILSEKASSVDHLNTVLKMKEVSDIYD
ILHTCIGLCQRNTPRLVPEESESLWFQLLDSFCEPLMDSYDDKIVSEVEKPVGILAESLE
TQAGDEACLNKWSIPKSHQGAHLLRRLFSQFIKEIVEGMVGFVRLPVIMSKLLSDNGNQE
FGDFKVTILGMLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPRSLICCICNC
LFTKNSSSSSIRVFNCGHATHLQCELLENEASNRSSSVGCPVCLPKKKTQRSRSKSVLME
NGLVSKVPSRKTQQAQGTIVLHPHENDVLENPYGLQQIPRFEILNNLQKDKRAIQIENLP
QLRLAPPAVYHEKVAKGIDFLTGESSSALAKIEKPSKTRQLRELKEKGSSIRFPLKSSIF
GKEKTSKR
NT seq 5967 nt   +upstreamnt  +downstreamnt
atgacgaagaagctgagcgcacctccaatggagctcgatctcgactcgttcatacacctc
acaagtgatgacgacgacgatgacgctctcaatagggttcctcatcggaccgttgatgaa
attctcaacgattctgattcttcctcatcatcgttgtcaccttccgatcactcctacctt
gcaaagcattcttccctttttgaggatgccaatgattctcgcgacgacgtcgtttctgtt
tctacccctaaaaccctttccgatgaacgccccaaatctgctgaatcactgaaattcaac
gagattgaggaccgactggttcagttcaaggccaattctttaagtcgggtgagaaccggc
gatctttcgggggattcgttttcgttgggccggagagtttcccggccgttgccgccgctg
tttggcagtgttagatcgaatgcgaagccgggggcggcgctcgcggctgctgcggccgct
tcgcggcctgttccgactcctcatgccgcggcgatcaagtcgaggagagcaggtagtggt
gctctgcagagggttttagatactgaggaattgggtggctcgggtttggataaattaggg
tcttccagtgatgttttgaatggggcgggttccgaaattgcttcatcggattggaaatca
ggcgaagaggatgataaatttgaagattttcagtcagctacaattgaatggactgtgaaa
gcagatgttgatgataaagtatcggttaaagatgagattgtggaaagttcacatagggat
ggtgaagttttcgacttggaaaaggtaccaacagaggtggtgcatacattagaagaagat
gaatcaagggttaatgattctgatgaaattttgttgaattccagtgccgaaacagggctt
gcagcttctcttagcattgaggaggagagttttgatttgaatgagggttctgcaatttca
ggttcgtatgatgttaaagatcagaatattgcatctgataatgtggaagagactgcttcc
aattccacatttttggatgctgcaaattctgctgataaggatgaaaaggtcagggaggat
ttgacattgaaaacacaggatctagagccagttgagccaccatctaccgatggtgaagtg
aatattgctggtgatgattggagtccaaaaagtgatgttaccgagcttgtggaagagaga
ttgggtcagttagagagcaagatgggtagtaaaaggacagagaagaaacctcgcttgaag
ccacttgaattggccgaagaacttgagaaaagtcaggcttcaactggtttgcactgggaa
gagggtgctgctgcccaaccaatgaggcttgaaggtgttcggaggggttcaacaacattg
ggatactttgagattgacaacaacaacactattacacggacaatatcatctccggcattc
aagcgtgatcatggttcgccacaagtcctggcagttcatcttaacttcattgcagtggga
atgtcaagaggggttgttatggttgtgcccagtaaatactctgcttataatgctgacaac
atggatgcaaagatcttgatgcttggtttgcaaggggagcggtctcatgcaccagtaacc
tccatgtgcttcaatcatcaaggggaccttctcttagcgggatatggtgatggtcatatt
accgtttgggatgtgcagagggcaacagctgcaaaagtaattactggagaacattcagca
cctgtaatacatacattgtttctggggcaggattctcaagttactcgtcaatttaaagca
gttactggtgatagtaaaggtctggtcctgttgcatgctttctcagtggttcccctgctt
aataggttctccatcaaaacacagtgccttcttgatggacaaagaacgggcacagtacta
tctgcttcaccacttcttcttgacgaatctagtggaagttctctgatgtcctcccaggga
aatgctacagggtcaaccagcagtattggtagcatgatggggggtgtagttgggggagat
gctggttggaaactcttcagtgaaggctcttctttggttgaagaaggtgtggtcatattt
gtcacccatcaaactgctctggtggtaaggctcagtccctcattggaagtctatgctcag
cttaataagcctgatggggttcgagagggttccatgccttacactgcctggaaatgcatg
acaatccactcacgaggcttgtctactgaaaatacacctgtggaagcatctgaaagagtt
tcgttgcttgcaattgcatgggataggaaagttcaggttgcaaagttggtcaaatcagag
ttgaaaatatatgggaaatggactcttgagagtacagcaataggtgtggcttggttggat
gatcagatcttggtggttcttacatcaacaggacaactttgtttgtttgcaaaggatggc
actgtgattcatcaaacaagttttgcagtagatggatctggaggagatgatcctgttgca
taccatacttattttaccaatatctttgggaaccctgagaaagcttatcagaatagtata
gctgtaagaggagctagcatatatatacttggacctgtgcatcttgttgtttctcgcctt
ctcacatggaaggaacgcattcaggttctgcggaaagcaggtgactggatgggtgccttg
aacatggcaatgacactttatgatggaaattctcatggtgttattgaccttcctagaagc
ctggaagctgtgcaggaggccataatgccctacctagtagagttgcttttgtcatatgtg
gatgaagtattttcttacatttctgtcgcattttgcaaccaaattggaaagatggaacag
ttggatgacccaaagaatagaggcagttctgtgcactttgagataaaagaacaattcact
cgtgttggtggtgttgcagttgagttttgtgttcatatcaaaaggactgacatcctgttt
gacgaaattttctcaaaatttgtgggtgttcaacatagagacacatttttggagcttttg
gaaccatatatattgaaggacatgcttggatctcttcctcctgagattatgcaagcactg
gtggagcattatagcagcaaagggtggttacaacgagttgaacaatgtgttcttcacatg
gacatttcttcattggatttcaatcaggttgtcaggttatgccgggaacatggattgtat
ggtgccctgatatatctttttaatagaggtttagatgatttcaaagcaccattagaggag
cttttggtcgttttgctaaatagaccaagagaaagtgcttcttcccttgggtacaggatg
cttgtttatctgaaatattgcttctccggtcttgctttccctccagggcatggaactctt
ccccctacacgcttgccatctcttagaacagaacttgttcagtttctactggaggatttg
aatgcccttaattcacaagcagtttcaagtctgtcatccaccagagctctccccaacctg
tatcatctcttagagttagatactgaagctactttagatgttttgagatatgcttttgta
gaagatgaaattacaaaacctgatgtttctttgcatgattcaactgatgcaaatatggag
gctgggaaagaaattgatttgatgggtgaaatccagaatttattggttcaaaatacagta
aatgctcttattcatattcttgatatctcccaaaaaaataggtcttctggcagcagtgat
attgggtcattagagttatggccttcaaagaaagacatgggtcatctatttgagtttgtt
gcatactatgttgcatgtaaaagagctaatgtctcaaaaactgtactgagtcagattttg
gagtacctgacttcggaaaataaacttccacaaagttcctccaaagaaagtgttggtact
ttgaaaagaagagagaaacaggtgcttgcacttttggaagtagtgcctgaaaaagattgg
gatgcatcttacgtgctacatctatgtgagaaagcagagttctaccaggtttgcggttta
attcattctatcaggcatcagtatcttactgctttagatagctatatgaaagatgtggat
gagcctgttcatgctttctcctttatcaaccatacattgtcacagcttagtgacactgaa
tctgctgcttttcggtcagcagtcatttctcgaattccagagctggtaaacttaagcaga
gagggcacattctttttgatcatcgatcattttaataaagagagtccacatatcctctct
gaacttcgttctcatccaaaaagcctattcctttatttgaagacggtcattgaggttcac
ttatctggcaccctcaacttttcttgtttacaaaacgacgatacaatggatgcttcttgt
ggacgtagggtgaagaatcagttatatggacttgaggcctacttggaaaggatattggat
ttcccaaagctactacttaataatccagttcatgtaactgatgaaatgatagaactttat
cttgagctattatgtcagtatgagcacacctcggttctcaaattcttggaaacttttgaa
agctatagagtagaacactgtttacgcttgtgccaagagtatggaatcattgatgcagct
gccttcttgttagagagggttggtgatgttggaagtgctcttttacttactctttctggc
ctcaatgataagttcaatgtgctcgagactgctgtgggaagtatactttctgagaaggct
tcttctgtggatcatttgaacactgttttaaagatgaaggaggtgagtgacatatatgat
atattacatacctgcattggactatgccagcggaacacccctcgtttggttcctgaggag
tcagaatccctctggttccagttgcttgactcgttctgtgaacctttgatggattcatat
gatgacaaaatagtttcagaagtagaaaaacctgttggaatactagctgaatccttggaa
acacaagcaggtgatgaggcatgcctgaataagtggagtatcccaaaatcccatcaaggt
gctcatcttctgaggagattgttttctcaatttatcaaagagattgttgagggaatggta
ggatttgttcgccttccagtaatcatgtcgaaactcctctctgacaatgggaaccaggag
tttggtgattttaaagtgaccatattgggaatgctgggaacttatggctttgaaagaaga
attctggacaccgccaaatccctgatagaggatgatacattctacaccatgagcttgctc
aagaagggagcttctcatggatatgcacccaggagcctaatatgttgtatatgtaattgc
cttttcactaagaattcttctagctctagcattcgagttttcaattgtggtcatgctact
catcttcaatgcgaacttctggaaaatgaggcatcaaacagaagttcttcagttggatgc
cctgtttgtctgcctaagaagaagactcagagatctagaagcaaatcagttctcatggag
aatggactggtgagcaaggttccatcaagaaagacccaacaagctcaggggactattgtt
cttcacccacatgaaaatgatgtgttagagaatccttatggacttcagcaaatcccacgg
tttgagatcttgaataatcttcagaaagataagagagcaatccaaattgaaaacctgccc
cagttgagacttgcaccaccagctgtttatcatgaaaaggtggcaaaaggaattgacttt
ttaaccggagaaagtagtagcgcccttgcaaaaatagaaaaaccaagtaaaaccaggcaa
ctcagggagctgaaagagaagggatcatcaatccgtttccctttaaagtcaagtatattt
ggcaaggagaaaaccagcaagcggtga

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