Vitis vinifera (wine grape): 100242157
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Entry
100242157 CDS
T01084
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100242157
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100242157
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_5
BMC
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
100242157
NCBI-ProteinID:
XP_019074707
LinkDB
All DBs
Position
4:join(2230995..2231213,2240611..2240869,2241289..2241443,2241522..2241743,2242484..2242678,2243000..2243224)
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AA seq
424 aa
AA seq
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MASVDPTAASASGRKPAEKWPGWPGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARI
HVISLPAGTTDCIVLISAKEQPHLRLSPAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKL
SSVTFLVGYSQALSIIGKEGSRVRAIEESSGTTVGILSRGCAGVPFYVSPDERIIKIQGQ
VLKVMAAMEAVLYHLRLYLVDSSVIPAFSEKCKTGISQADQSLSLHHSTPAHQPGADSMY
SLPLLGHEAKVEAKIPSSYSSLYAQEPVLGGLPLRRSDRAAAPAQRTERIKIPFSAAKDI
IGIAGETIDHIRRTSGSIITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELLESHHQPG
REGSIYDNMDAGLSSNSQFALPTHPLSPFSPQYRFPSQPSGENGISSAGEHTGSRFWKGD
QISE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtggatcccacagcagcttcagcaagcggcagaaaaccggcggagaagtgg
ccgggatggcccggccagaacgctttccgactcatcgtgccgggctcggctgtcggctcc
atcatcgggcgcgaagggaagatcatcaagaggatctccgaaggaaccggcgctcgaatc
cacgtcatttctcttcccgccggaaccactgattgcatcgtactgatatcggcgaaggaa
cagccacacttacggctatccccagcaatggaagctgtaatagaagtattcaagcgagtt
actgggctgtaccccattgatggcaatgggatgtgctcaaaagcttctgaggttaaacta
agctcggtgacattcttagtagggtattcacaagccctttcgataataggaaaagaagga
tcaagagttagagcaatcgaagaaagctcaggcaccacagtagggattttatcacgaggt
tgcgcaggagtaccattttatgtgagcccggatgaaagaatcataaaaattcagggtcag
gttttgaaggtgatggcagcaatggaagcagtactgtatcatctgaggctgtacttagta
gacagcagtgtcataccggcattcagcgaaaagtgcaagactggtatctcgcaggccgat
caaagcctctcattgcatcattctacccctgcccatcagcctggagctgattccatgtat
tcccttcccttgttggggcatgaagccaaggtggaggcaaaaatccctagctcttattcc
tcattgtatgcccaagagcctgtgcttggtggattacccttgaggaggtctgaccgtgcc
gctgcgcctgctcagagaacggaaagaataaaaatccctttctcagctgccaaggatatc
attggcattgctggcgaaactattgaccacatccgtcggacgagtggatccatcatcaca
atagaagaggatagaagcctacctgacgagtacattctagaagtgaggggcacaacctca
cagctccaaacagctcaacagctcattgaggagcttcttgagagccatcaccagccagga
agggagggaagtatctatgacaacatggatgctggattaagttccaactcccagtttgca
ctacccacccaccctctttctcccttctcaccccaatatcgcttcccatctcaaccatca
ggggaaaacggaatttcaagtgcaggtgagcacactggttcgaggttttggaagggtgat
cagatttcagaataa
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