Vitis vinifera (wine grape): 100242229
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Entry
100242229 CDS
T01084
Name
(RefSeq) synaptotagmin-5 isoform X1
KO
K28063
extended synaptotagmin
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100242229
Membrane trafficking [BR:
vvi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
100242229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
PDZD8_N
Motif
Other DBs
NCBI-GeneID:
100242229
NCBI-ProteinID:
XP_059592239
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All DBs
Position
4:join(5238152..5238256,5238406..5238508,5238594..5238646,5238754..5238874,5239839..5239960,5241090..5241191,5241373..5241447,5241832..5241911,5242752..5242902,5242993..5243223,5243558..5243845,5244068..5244181,5244448..5244594)
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AA seq
563 aa
AA seq
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MSFFFGIVIGIACGIAVVVVFARLANLRSKSRCDLATTVAAFARMTVQDSRKILPPQFYP
SWVVFSQQQKLTWLNSHLRKIWPYVDEAASELIRSNVEPILEQYRPVILSALKFSKLTLG
TVAPQFTGVSILEGEAGEVSMELEMQWDGNPNIVLDIKTRVGVGLPVQVKNIGFTGVFRL
IFKPMVEEFPCFGAVCYSLREKKNLDFKLKVVGGDITALPGISDAIEETILDAIEDSITW
PVRKIVPIIPGDYSDLELKPVGTLEVKLVQARDLTNKDLIGKSDPYAVLFVRPIRDRMKT
SKTINNELNPIWNEHFEFIVEDASTQHLTVRIFDDEGVQASELIGCAQVRLKDLEPGKVK
DVWLKLVKDLDVQRDKKYRGEVRLELLYCPFGMESVFTNPFRPNLLTSLEKVLKADGTEA
DDIKKSHSLKKRDIIVRGVLSVTVISAENLPVVDLIGKADPYVELTMKKSNTKHRTRVVN
NSLNPIWNQTFDFVVEDGLHDMLILDVWDHDTFGKDKIGRCIFTLTRVILEGEFRDNFPL
EGAKSGSLNLHLKWSPQPIFRDT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttcttcggcattgttatcggtatcgcctgcggcattgcggttgttgtcgtt
ttcgctcgtttggccaatctccgatccaagtctcgatgcgacttggcgacaactgtggct
gcgttcgcgagaatgacagtgcaagattccaggaaaattcttcctccccagttctaccca
tcttgggtcgtcttttctcagcaacagaagttaacttggctgaattctcatcttagaaag
atatggccatatgttgatgaggcagcttctgaattgataaggagtaatgtggagccgatt
cttgaacaatataggcccgttatcttgtcagctctcaagttttcgaaattgacactgggg
actgtggctccccaatttacaggagtttctatccttgaaggtgaagcaggggaagtttct
atggagttggaaatgcagtgggatggaaacccaaatattgtacttgatattaagacgaga
gtgggtgtgggactacctgtacaggtaaaaaacattggattcactggggttttccggtta
attttcaaaccaatggttgaagagtttccgtgttttggagctgtttgttattccttgaga
gaaaagaaaaacctggattttaaacttaaagttgttggtggtgatataacagcactccca
gggatttctgatgctattgaggaaacaatactagatgctattgaagattctataacatgg
cctgttcgaaaaattgtccccataatacctggagattacagtgacctggagttgaagcct
gttggaacattagaggtgaagcttgtgcaagccagggacttaacaaataaagacctgatt
gggaaatctgatccctatgctgtgttatttgttcgtccaatacgtgacagaatgaaaaca
agcaaaacaataaataacgaactgaatccaatttggaatgagcatttcgagttcatagta
gaagatgcatcgacccaacacttgacagtaagaatttttgatgatgaaggtgttcaagct
tctgaactcattggttgtgctcaagtgcggttaaaggaccttgagcctggtaaggtgaag
gatgtctggttgaaactggtcaaagatttggatgtccaaagagataagaaatacaggggg
gaggtccgcttggagctattgtactgtccttttggcatggagagtgtatttacaaatcca
ttcaggcccaatttattgacctccttagagaaagtccttaaagcggatggaacagaggct
gatgatattaaaaaatcacactcgctcaagaaaagggatattattgtgaggggagtcctc
tctgtgacagtaatatctgcagaaaacttaccagttgtagacctaataggaaaggccgat
ccctatgtcgagcttacaatgaagaaatccaatacaaaacacagaactagggttgtaaat
aacagcctgaatccaatttggaatcaaacatttgactttgttgtggaagatgggttacat
gatatgttaattctggacgtctgggatcatgacacttttgggaaggataaaattgggaga
tgcatcttcacgctcactagagtcatattagaaggggagttcagagataactttcccctc
gaaggggctaagtcaggaagcctgaatttacatctcaagtggagcccccagccaatattc
cgggatacttga
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