Vitis vinifera (wine grape): 100242311
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Entry
100242311 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100242311 isoform X2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100242311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100242311
03032 DNA replication proteins [BR:
vvi03032
]
100242311
Spliceosome [BR:
vvi03041
]
Complex A
U1 snRNP components
Sm proteins
100242311
U2 snRNP components
100242311
Complex B
U1 snRNP components
100242311
U4/U6.U5 tri-snRNP components
100242311
Complex C
U2 snRNP components
100242311
DNA replication proteins [BR:
vvi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100242311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
100242311
NCBI-ProteinID:
XP_002285043
LinkDB
All DBs
Position
1:complement(join(5735794..5735910,5735985..5736089,5736234..5736311,5736475..5736493,5736623..5736627))
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AA seq
107 aa
AA seq
DB search
MSGPMEEDSAKNEEEDFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggccaatggaagaagatagtgccaagaatgaggaagaggactttaacacaggg
ccactttctgttttaatgatgagtgttaaaaataacactcaggtgcttatcaattgtcga
aacaacaagaagcttcttggccgggtgagagccttcgataggcactgcaacatggttctt
gaaaatgtcagggagatgtggacagaggtaccaaaaactgggaaaggcaagaaaaaggcc
aatccagttaacaaggatagattcattagcaagatgttcctccgtggagattctgtgatc
attgttcttagaaatcccaagtga
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