Vitis vinifera (wine grape): 100242486
Help
Entry
100242486 CDS
T01084
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100242486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100242486
03036 Chromosome and associated proteins [BR:
vvi03036
]
100242486
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100242486
Coactivators
SAGA/TFTC/STAGA complex
100242486
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100242486
STAGA complex
100242486
TFTC complex
100242486
SAGA complex
100242486
SLIK complex
100242486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
100242486
NCBI-ProteinID:
XP_010654342
LinkDB
All DBs
Position
8:complement(join(18822223..18822366,18822604..18822639,18822788..18822852,18822950..18823028,18827950..18828024,18828708..18829229,18838285..18838449,18838777..18839337))
Genome browser
AA seq
548 aa
AA seq
DB search
MEQQTSSTAQPSEAPQPPSTLPPPSSVPPPSSTIPSSPNPNPNSNPNPNPNPTTPIPSPN
HNINPSSTPKPPVSVNPQPQQQQSLQNSQTRPPVHRPWQQQSHFQHFSSNLSSSSSSSST
PSLSTSTSSSAVSAPPSQRGGIAIGVPAGQPTPFSSLNPPTFGQQYGGLGRSAVNVPESV
ANTNTSQVRPSIQGSQGMGMMGTLGSGSQMRPGGISAHHQQRPVQSSLRPQSTVNNQSPA
TQNFQGHGLLRASSVGSPGAPSPNTSQSMQPHNQPWLSSGSQGKPPLPSPSFRPQMTAQS
LPQRSHIPQQHHHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRVPQSLPHPQ
QIGRVQGSGNQKPSSLAIVQPSTPQLGPHSRTASAEASESGNRILSKRSIHELVNQIDPS
EKLDPEVEDILVDIAEDFVESITTFGCSLAKHRKSPTLEAKDILLHLERNWNMTLPGFGG
DEIKTFKKPFVSDIHKERLAAIKKSAVGTESANTKSSSGQGAGNTKGHPAKTSANVLSSP
NLKIREAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcaaacatcaagcactgcacagcccagtgaggctccacaaccaccctccact
ctcccacctccatcctcagtccctccaccttcttcaacaatcccatcttccccaaaccct
aaccctaattctaaccctaaccctaaccccaaccctactacccccatccccagtcctaat
cataacattaaccctagttctactcccaaacctccggtctcggttaaccctcagccacaa
caacagcagtctcttcaaaactctcaaaccaggcctccggtccacagaccatggcaacag
caatcacactttcagcacttttcgtccaatctctcgtcctcttcatcatcctcttcgact
ccgtcattgtctacatcgacctcttcttccgccgtttctgcacctccgtcgcaacggggt
gggattgccattggtgttcctgctgggcaacccactccattttcgtctctcaacccgcca
acgttcggccagcaatacggcgggttgggtcggagcgctgtcaatgtgcccgaatcggtt
gccaacaccaacacgtcccaggtaaggccatctattcaaggaagtcaaggtatgggaatg
atgggaacactgggctcgggttctcaaatgcggccaggggggatttcagcacaccatcaa
cagaggcctgtccaatcatctctcagaccccaatccactgtaaataaccagtcccctgct
acccaaaattttcaagggcatggccttttaagagcttcatcagtgggatctccgggtgca
ccatcaccaaatacatcacaaagtatgcagcctcataatcagccatggttatcatctgga
tcacaagggaagcctcctttgccatccccatcgtttagaccacaaatgactgctcaatcc
ttgcctcaaaggtcacatattcctcagcaacatcatcatcccttgccaactgcttcacag
cagcagcaaatgtcaactgcacaacaaccacaacaaccgttgctatcacatcaacaacag
gagcattatgggcagcaatttccaccatcaagggtaccacaatctttaccccacccacaa
cagatcgggagggttcagggatcaggaaaccagaagccttcctctcttgcaattgtgcag
cctagcacgccccagttggggccccatagcagaacagctagtgcagaggccagtgaatct
ggtaataggattttgagcaagagaagcatccatgagctagtaaatcagattgatccatca
gaaaagttggatcctgaagtcgaagacattcttgtggatattgcagaggactttgttgag
tctattacaacatttggttgctcattagccaagcatcgaaaatcacctacattagaagca
aaggacatacttctacatctagaaagaaattggaatatgactcttcctgggtttggtgga
gatgagattaagaccttcaaaaaaccatttgtaagtgatattcacaaggaacggcttgca
gcgataaagaagtcagctgtggggactgagtcagcaaatacgaagagttccagtggacaa
ggtgctggaaatacaaagggtcatccggcaaagacatctgccaatgtcttgagctcgcca
aaccttaagatccgtgaagctgcatga
DBGET
integrated database retrieval system
