KEGG   Vitis vinifera (wine grape): 100242559
Entry
100242559         CDS       T01084                                 
Name
(RefSeq) flap endonuclease 1 isoform X2
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03030  DNA replication
vvi03410  Base excision repair
vvi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100242559
   03410 Base excision repair
    100242559
   03450 Non-homologous end-joining
    100242559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100242559
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100242559
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100242559
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100242559
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     100242559
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100242559
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100242559
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-GeneID: 100242559
NCBI-ProteinID: XP_059598341
LinkDB
Position
14:complement(join(244061..244138,246255..246309,246405..246451,246565..246621,246711..246825,247251..247332,248443..248527,248600..248719,249103..249153,249245..249310,249632..249679,249749..249797,249906..249959,250074..250133,250227..250285,250368..250484,250578..250589))
AA seq 384 aa
MGIKGLTKLLADNAPKAMKEQKFESFFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFSRTIRLLEAGLKPVYVFDGKPPDLKKQELAKRFSRRADATEDLTEALETGN
KEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED
MDSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIENILENINRERYQIPDDWPYQEARRLFKEPQVFSDDEQLDIKW
SAPDEEGLITFLVNENGFNSDRVTKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKRKE
TEDKAAKETTNKKSKAGGGSKRKK
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgggtattaagggtttaacgaagcttctggctgacaatgccccaaaggccatgaaagag
cagaaattcgagagcttcttcggccgcaaaatcgccatagatgccagcatgagcatctac
cagttcctcattgttgttggaagaagtgggactgaaatgctcacaaatgaggctggcgaa
gttactagtcatttgcaaggaatgttttctcggacaattaggcttctggaggctggattg
aagcctgtttatgtttttgatgggaagcctccagatttgaaaaagcaagagcttgcaaaa
cgtttctcaaggagggcagatgccactgaggatttgacagaagccttagagactggcaat
aaagaagagattgaaaaattcagtaaaagaacagtgaaggtgacaaagcaacacaacgaa
gattgcaaaaagcttttaagactgatgggagtgcctgtaattgaggctccttctgaagca
gaggcacagtgtgctgcactttgcaaatcagggaaggtctatgctgtggcttctgaagac
atggattccctaacttttggagctcctaaatttcttcgtcacttaatggaccctagctca
agaaaaatcccagtgatggaatttgatattacaaagattttggaggagctgaatcttacc
atggatcaattcattgacctgtgcattctttcagggtgtgattattgtgacagcattcga
ggtattggggggcagactgcattgaagctcatccgccaacatggctccatcgagaatata
ttggagaacataaacagagaaaggtaccagatacctgatgattggccatatcaagaggct
cggcgcctttttaaagaaccccaagtcttttctgatgatgagcaacttgacatcaagtgg
agtgctccagatgaagaagggttgataacctttctggtgaatgaaaatggattcaacagt
gacagagtaacaaaggcaatagaaaaaatcaaaacagccaagaataaatcatcacagggc
cgattagaatcattctttaaaccagtcgttagctcatcaatacccatcaagcgtaaggaa
acagaggacaaggctgcaaaggaaactactaacaaaaagtcgaaggctggtggtggaagc
aagaggaagaagtag

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