KEGG   Vitis vinifera (wine grape): 100242719
Entry
100242719         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100242719 isoform X1
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100242719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100242719
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100242719
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 100242719
NCBI-ProteinID: XP_010649142
LinkDB
Position
4:complement(join(19853867..19853995,19854103..19854189,19854267..19854409,19854517..19854622,19854718..19854810,19855207..19855332,19855447..19855543,19856111..19856248,19856341..19856461,19856558..19856691,19856758..19856840,19856924..19857045,19857869..19857982,19858141..19858284,19858379..19858457,19858541..19858651,19858732..19858906,19859987..19860102,19860250..19860357,19860718..19860785,19862788..19862947,19863034..19863170,19863305..19863421,19863564..19863729,19864858..19865019,19865505..19865660))
AA seq 1063 aa
MDSDTIMEPMDLKVRELLKEVQLDYSSATTKLVDDTVSAIKQAIDTIPEDLKVTADFAPQ
FVRDIGADKVEFNFKKPKLFEIGGSYSIRCVAKPDVDIDLFVRLPKECFHEKDYLNHRYH
AKRFLYLCIIKKYLNSSSFIRKVEWSTLQNEARKPVLVVYPAMELAEVPGLSVRIIPTAT
SLFSILKLNLKRNNVCSLKQDESTPQATPKYNSSILEDMFLEDNAEFVKRTFLGWKELGE
ALILLKVWARQRSSIYAYDCLNGFLISVIMSYLATDSGRNLINNSMKPMQIFRVTLDFIA
TSKLWNTGLYFKSQSLLNISKEELLERKQYLRLFPVVISESLAHFNLAFRITGGGFLELQ
DEAVLTLSCIGKCKDGGFEELFMTKIDYPAKYDYCMRLNLKGNSDVYALGFCLDEECWRS
FEQKVHFLLCQGLSDRAKFIRVSWKNATSECNVENGLSIFDREPLLIGISVSSLEKAFRV
VDVGPNAEHKDEALKFRKFWGEKAELRRFKDGMIAESTVWESKQWERHTIIKRITEYLLL
RHLSLSERNIVHIVDQLDFSLVNGVGDSISFSGSLLEAFEVLSKRLHLLKDIPLKVSSVQ
PLDSAFRFTSVFPPEPHPLANEKSAVPRLNKLTSTCIQPLEVMIQLEGSGNWPMDDVAIE
KTKSAFLLRIGESYVSLQNNWGMICTATEENVDVFMSGYAFRLRILHERGLSLLNRQNGS
NQLKHISSVDKELFTRGQHSSMINGLQGCYPIYGPVVRLAKRWVASHLFSACLVEEAVEL
LVAYLFLKPLPFYVPCSRISGFLRFLRLLSEYDWNFSALVVDINSDLSPSDEKEINENFT
SSRKGYEENAQNVNPAMFLATAYDKASEAWTRFSPNSSELRRLVAYARSSANLLTKLILG
GQIDSYKWECLFRTPLNNYDAVILLHREKMPYPQRLLFPSEMNQGKHVAQGNASKAFHPF
LLPEHMKGNSPDLKDTLLVDFDPLRCFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSS
KKRGRSEENEEEKDPVNVLKAVGEVGKGFVRSIYLLKSPRLRN
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggattctgatacgattatggaaccgatggatttgaaggtgcgagagctgttgaaggag
gtacagctcgactactcttctgcaacaacaaagctcgtcgacgacaccgtttcagccatt
aaacaagccatcgatacaatccctgaagacttgaaggttacagcagattttgctccacaa
tttgtcagagacattggcgctgataaagttgaattcaacttcaagaagccaaaattattc
gaaattggtggtagttattcaatacgctgtgtggcaaagcctgatgtagatattgatctt
tttgttaggttgccaaaggagtgtttccatgagaaggactatttgaatcaccgttaccat
gcaaaaaggttcctctatctctgcataatcaagaagtatttgaactcttcttccttcatt
cgaaaggttgaatggtccaccctacaaaatgaggctcgaaaaccagtattggttgtctat
ccagctatggagcttgctgaagttcctgggctttctgtgagaataatacctacggcaaca
tccctgtttagtattttgaagttaaacttgaagcggaacaatgtttgttctttgaagcaa
gatgagagtactcctcaggctacaccaaaatacaatagtagtattttggaagacatgttt
ctagaggacaatgcggaatttgtgaagcgaacttttcttggttggaaggagttgggggag
gctttaattttgcttaaggtatgggctcggcagagaagttcgatatatgcttatgattgc
ttaaatggatttctgatctctgtcataatgtcataccttgcaacggattctggaaggaat
ctcattaacaattcaatgaagccaatgcagatatttcgtgtgaccttggatttcattgcc
acatctaagctatggaatactggtctttatttcaagtctcaaagcctactgaatatttca
aaggaggagttgctggaaaggaagcaatatttaagattatttcctgtagttatatctgag
tcacttgctcattttaatttggcgttccggattacaggaggtggctttttggagctccaa
gatgaggctgttttgacccttagttgcataggcaaatgtaaagatggtgggtttgaggag
ctttttatgactaagattgactatccagctaaatatgactactgcatgagattgaatttg
aaaggaaatagtgatgtttatgcattggggttttgcttggatgaggaatgttggagatcc
tttgagcagaaagttcattttcttctgtgtcaaggattgagtgatagagcaaagttcatc
cgtgttagctggaaaaatgccacttcagaatgcaatgtggaaaatggtttatcaatcttt
gatcgagagccattgctcattgggatttcagtcagctctttagagaaagcttttagagtg
gtcgatgttggtccaaatgctgagcataaagatgaggctcttaaattccggaagttttgg
ggagagaaagcagagcttcgaagatttaaagatgggatgattgcagaaagcacagtatgg
gaaagcaagcaatgggaaaggcataccatcataaaaaggattaccgaatatctccttttg
cggcacctttccttgtcagaaagaaatatcgtgcatattgtagatcaacttgatttctct
ctggttaatggtgttggagattctatctcattttctggaagtttgcttgaggcatttgaa
gtgttgtcaaagcgattacatcttctcaaagacattcctttgaaggtgtctagtgtgcag
cctttagattcagctttcaggtttacatctgtcttccctcctgaacctcatcccctagcc
aacgaaaagagtgctgttcctagattaaataagctcacttcaacctgtattcaaccattg
gaagttatgattcagttggaaggttcaggcaactggccaatggatgatgtagctattgag
aagactaaatctgctttccttctaagaattggagaaagttatgtcagtctccagaacaat
tggggtatgatctgcactgctactgaggaaaatgtggatgtttttatgtctggatatgca
tttcgtcttagaattttgcatgaaagaggcctgagtttgttgaataggcaaaatgggagt
aatcaactgaagcatatttcttctgttgacaaggaactttttacccgtggccagcattct
agcatgattaatggtctacagggttgttacccaatatatgggccagttgttcggctagcg
aagcgatgggttgcttcgcatctcttttcagcttgcttggtcgaggaggcagttgagcta
ttggttgcatatctctttttgaagcctttaccattttatgtgccttgctctcggatatca
ggatttctaaggttcttacggttattatcagagtatgactggaatttctctgctttggtg
gttgacataaatagtgatttgagcccaagtgatgaaaaagagattaatgagaattttact
tcaagtagaaaaggttatgaagaaaatgcccaaaatgtaaacccggcaatgttcttagca
acagcttatgataaggcatctgaagcttggaccagattctcaccaaactcatcagagctt
agaaggttggtggcctatgcccgaagcagtgcaaacctattgactaaacttattttgggg
ggtcaaattgattcttacaaatgggagtgtcttttccgtactcccttgaacaactatgat
gctgtaattcttctccacagggagaaaatgccttatccccaacgtcttctcttcccatct
gagatgaaccaagggaagcatgttgctcagggcaatgctagcaaggcttttcatccattt
ttgttgcctgaacacatgaaaggaaactccccagatttgaaagatacgctactggtagac
tttgatccactgaggtgcttcattggggatttagaggaagagtttccaaacgctttcaag
ttgtggtacgattctctaggaggtgatgccattggcatgatgtgggagagatcatcttca
aagaaacggggacgaagtgaagagaatgaggaggaaaaagatccagtcaatgtgctaaaa
gctgtcggtgaggtcgggaaagggtttgtgaggagtatttatctactcaagtccccaagg
ctcaggaactga

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