Vitis vinifera (wine grape): 100242721
Help
Entry
100242721 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100242721
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100242721
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100242721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
DUF4302
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100242721
NCBI-ProteinID:
XP_002270570
LinkDB
All DBs
Position
8:complement(join(4686052..4686361,4686468..4686575,4686702..4687084,4688128..4688233,4688324..4688386,4690921..4690967,4691103..4691243,4691871..4691876))
Genome browser
AA seq
387 aa
AA seq
DB search
MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ
CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRSAIFHHPTLGDFELQ
HLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRSHFLVFSTHPNATA
SGPVPASLVQVGENEPAAITVASPSIPLPAGGDEPSQEIPQFPSVQTDHMSASASRSAVT
PRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLNAVSMRYKESISKSTRGWKER
LFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAGQASVSSHLADSVTEQSNQ
NERETRAENPLNDSNTPAACAASSGSN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaggggatggaagaggtaaaaaattctgagaatcatatgacatcagctgca
gcttttgttgaaggaggagtgcaagaagcttgtgatgatgcttgcagcatatgccttgaa
gcattctgtgacagtgatccttctacgttgactagttgcaagcatgagtttcaccttcag
tgcattcttgaatggtgccagagaagctctcaatgtccaatgtgctggcaatcaattagc
ctgaaggatccaaccagtcaggaattgcttgaggctgtagaacgggagaggaatattagg
cttactccaccaagaagtgcaatatttcatcatcccacccttggggattttgaattacag
catttaccagtgggcacaaatgatcctgaactcgaagagcgaataattcagcacttggct
gctgctgctgctatgggaagggctcaccacattgctcgaagggaaggccagaggagtcgt
tcatctgctcatgggcgttcacacttcttggtattctcaactcatcctaatgcaactgct
tcaggtcctgttcctgcctctctggttcaggtaggagaaaatgaaccagctgcaataact
gtagctagtccatctatcccacttccagctggtggggatgagccatcgcaggaaatccca
caatttccatctgttcaaactgatcacatgtctgcatcagcatccagatctgctgtcaca
ccacgacgaatttcctttaataatcgcagctctgcaagtcaatcttcacctccagatcaa
gatagagcaggaccttctgagttacagtccttttcagaatccctgaaatctcgacttaat
gcagtatcaatgagatacaaagagtcgatttcaaagagtacaagagggtggaaggagagg
ctgttctctcgtaacaattccatggctgaccttggttctgaagttcggagagaggtgaat
gctggaattgctagtgtatctcgcatgatggagcgtcttgacaccagggaaaataatggg
gccggccaggcttctgtatcaagtcatctggctgattctgttacggagcagagtaaccag
aatgagagagagactcgtgctgaaaaccctctgaacgacagcaatacaccagctgcttgt
gctgcaagctcgggttcaaattaa
DBGET
integrated database retrieval system
