KEGG   Vitis vinifera (wine grape): 100242856
Entry
100242856         CDS       T01084                                 
Name
(RefSeq) RING-H2 finger protein ATL16
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100242856
Enzymes [BR:vvi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100242856
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100242856
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-C3HC4_3 Prok-RING_4 Prok-RING_1 zf-RING_16 zf-RING_4 zf-RING-like PHD_NSD
Other DBs
NCBI-GeneID: 100242856
NCBI-ProteinID: XP_002263905
UniProt: A0ABY9C5V3
LinkDB
Position
7:complement(6321337..6322392)
AA seq 351 aa
MDRFHMHFSNHGSEALVYIKTHENPIYQPSSPASDTAFPILAIAVLSIMATAFLLVSYYI
FVIKCCLSWHHIELLRRFSTSQSRQQEDPLMDYSPTFLNRGLDESLIHQIPTFLFRRGQS
EEGSFHGCVVCLNEFQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSISGTTRYR
NDPIIAPSSSPQDPRPFSEALMGGDDDFVVIELGGGDDRGVILPPRQQERADSRELLVQS
RGPSPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLY
MTVQEIIRNKNRPLSEVSTSQECDSRVRRSFFSFGHGRGSRNAVLPIEFLV
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggatcgattccacatgcatttttccaaccatggatccgaagctcttgtttacatcaaa
acccatgaaaacccaatctatcaaccctcctcccctgcttcagacactgctttccctatc
ttagccattgctgtgctaagcattatggccacggctttcttactagttagttactacatc
ttcgtgatcaagtgctgcttgagctggcaccatattgaactgctcagacggttttctacc
tctcaatctcgacagcaggaagatccactgatggactattcacctacgtttctgaatcgt
gggctggatgaatccttgattcaccaaatcccaacttttctgttcagaagaggacagagt
gaagagggaagcttccatggatgtgtggtctgtttgaacgagtttcaagaacatgatatg
ataagagttcttcccaactgcagccatgcattccacttggattgcattgatatatggcta
caaagcaatgctaattgtcccttatgcagatcaagcatttcaggaacaacccggtacaga
aatgatccgatcattgccccaagctcttcaccccaagatccacggccattcagtgaggct
ctcatgggcggtgatgatgattttgtggtcatagaattggggggaggagacgacagaggc
gtcatactaccaccaagacaacaagaaagagctgattcaagagaactgttggtgcaatct
agaggcccctccccaacaaagttgcagcagaagctagagaacaaaaaatcaagaaagttt
cattatgtttcaagtatgggagatgagtgcattgatgtaagagaaaaagatgatcagttc
ttaatccaacccatcaggagatctttctcaatggactctgcggcagatccccagctttat
atgaccgttcaggagatcataaggaataaaaataggcctctcagtgaggttagtactagt
caagaatgtgatagcagagtcagaaggtcattcttttcctttggacatggccgaggatcc
agaaatgcagttcttcctattgaattcttagtatag

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