Vitis vinifera (wine grape): 100242856
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Entry
100242856 CDS
T01084
Name
(RefSeq) RING-H2 finger protein ATL16
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100242856
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100242856
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100242856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_4
Prok-RING_1
zf-RING_16
zf-RING_4
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
100242856
NCBI-ProteinID:
XP_002263905
UniProt:
A0ABY9C5V3
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Position
7:complement(6321337..6322392)
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AA seq
351 aa
AA seq
DB search
MDRFHMHFSNHGSEALVYIKTHENPIYQPSSPASDTAFPILAIAVLSIMATAFLLVSYYI
FVIKCCLSWHHIELLRRFSTSQSRQQEDPLMDYSPTFLNRGLDESLIHQIPTFLFRRGQS
EEGSFHGCVVCLNEFQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSISGTTRYR
NDPIIAPSSSPQDPRPFSEALMGGDDDFVVIELGGGDDRGVILPPRQQERADSRELLVQS
RGPSPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLY
MTVQEIIRNKNRPLSEVSTSQECDSRVRRSFFSFGHGRGSRNAVLPIEFLV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattccacatgcatttttccaaccatggatccgaagctcttgtttacatcaaa
acccatgaaaacccaatctatcaaccctcctcccctgcttcagacactgctttccctatc
ttagccattgctgtgctaagcattatggccacggctttcttactagttagttactacatc
ttcgtgatcaagtgctgcttgagctggcaccatattgaactgctcagacggttttctacc
tctcaatctcgacagcaggaagatccactgatggactattcacctacgtttctgaatcgt
gggctggatgaatccttgattcaccaaatcccaacttttctgttcagaagaggacagagt
gaagagggaagcttccatggatgtgtggtctgtttgaacgagtttcaagaacatgatatg
ataagagttcttcccaactgcagccatgcattccacttggattgcattgatatatggcta
caaagcaatgctaattgtcccttatgcagatcaagcatttcaggaacaacccggtacaga
aatgatccgatcattgccccaagctcttcaccccaagatccacggccattcagtgaggct
ctcatgggcggtgatgatgattttgtggtcatagaattggggggaggagacgacagaggc
gtcatactaccaccaagacaacaagaaagagctgattcaagagaactgttggtgcaatct
agaggcccctccccaacaaagttgcagcagaagctagagaacaaaaaatcaagaaagttt
cattatgtttcaagtatgggagatgagtgcattgatgtaagagaaaaagatgatcagttc
ttaatccaacccatcaggagatctttctcaatggactctgcggcagatccccagctttat
atgaccgttcaggagatcataaggaataaaaataggcctctcagtgaggttagtactagt
caagaatgtgatagcagagtcagaaggtcattcttttcctttggacatggccgaggatcc
agaaatgcagttcttcctattgaattcttagtatag
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