KEGG   Vitis vinifera (wine grape): 100242984
Entry
100242984         CDS       T01084                                 
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
  KO
K14301  nuclear pore complex protein Nup107
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100242984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100242984
   03036 Chromosome and associated proteins [BR:vvi03036]
    100242984
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100242984
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100242984
SSDB
Motif
Pfam: Nup84_Nup100
Other DBs
NCBI-GeneID: 100242984
NCBI-ProteinID: XP_059595395
LinkDB
Position
9:complement(join(617447..617521,618287..618400,618545..618705,619647..619788,621611..621813,622023..622179,622286..622460,624656..624844,624953..625051,625713..625835,626331..626462,626980..627068,628300..628357,628446..628681,629001..629099,630477..630644,630731..630823,632629..632787,633495..633620,633762..633788,638041..638161,639786..639855,644609..644988,646681..646760))
AA seq 1091 aa
MDVEMETSPSYFDPEDLSIREKYRRYGKRQSGSSISPYQENSVSKYSGTRLLFDGQSIQR
QPNAALFLEDIKLEVESFEADHSEGTPARAQSASKRRLSIDSHGISEVDAGIDSVRRVGS
HSLKSCKHEDDLLADAGETTFALFASLLDSALQGLLSIPDLILQFETSSRNVSESIRYGS
TTWHRVVEDKLMRQKALLLLDEAASWSLLWHLYGKGNEELPEELILSPTTSHLEACQFVA
NDHTAQLCLRIVQWLEGLASKALDLENKVRGSHVGTYLPSSGIWHHTQRFLKKGVSNSNT
VHHLDFDAPTREHAPLLPDDKKQDESLLEDVWTLLRAGRLEEACDLCRSAGQPWRAATLC
PFGGLDQFPSIESLMKNGKNRTLQAIELESGIGNQWRLWKWASYCASERISEQDGGKYET
AVYAAQCSNLKRMLPICMNWESACWAMAKSWLDIQVDLELARLRPGGTDQFKNYGDIVDG
SPGEGDSESQSSVGPENWPFQVLNQQPRQLSALLQKLHSGDTVHEAVTRGCKEQHRQIEM
NLMVGDIPHLVDLLWSWISPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLADQMKDSFK
EKIMAIGDLIVHMYAMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNASLHVKHK
IFLSAIEYLPFSPGDDSKGTFEEIMDSVLSRSREIKLGKYDKSSDVAEQHRLQSLQKAMA
IQWLCFTPPSTITDAKAVSVKLLLRALIHSNILFREFSLISMWRVPAMPVGAHTLLSFLA
EPLKQPPETLHAFEEYNVAENLKEFQDWSEYYSCDATYRNWLKIESEIAEVPPLELSLEE
RQRAIAAAKETLNSSLSLLLRKENPWLVSDENNIYESMEPVFLELHATAMLCLPSGECMC
PDATLCTTLISALYSSVSEEIVLNRQLMVNVSISPRDNYCIEFVVRCLAVEGDGLGSHEL
CDGGVLGTVMAAGFKGELARFQAGVTIEISRLDAWYSSNDGSLKGPATYIVQGLCRRCCL
PELALRCMQVSVSLVQSGDPPENHELIELVACPETGFVHLFSQHQLQEFLLLEREYSIYK
MELQEDSLLES
NT seq 3276 nt   +upstreamnt  +downstreamnt
atggacgttgaaatggagacatctccaagctatttcgatcccgaagatctcagcattcgg
gagaagtatcgcagatatggaaaaaggcagtcgggctcaagcatatcgccctaccaagaa
aattcagtttcaaagtacagtggaaccaggcttttgtttgatggacagagtattcaaaga
cagcctaatgctgctctttttcttgaagatattaaactagaagttgagagctttgaagct
gatcactcagaaggcacacctgctagggcacaatctgcttctaaaaggagattatccatt
gatagtcatggaatctcagaggtggatgctggtattgattctgtccgccgagttggaagt
cattcattgaaatcttgcaagcatgaagatgacttactggcagatgctggagagacaacc
tttgctttatttgcatctttacttgattctgctcttcaagggttgttatctatccctgat
ctgatattacaatttgagacatcttcccgaaatgtttcagagtcaattagatatggttcc
accacatggcatcgggttgtggaggacaaattgatgaggcagaaggctctgctcttgctt
gatgaggctgcttcctggtctcttctgtggcacctatatggaaaaggaaatgaagaactt
cctgaagaactaatcctgtccccaacaacttcacatttggaggcttgccaatttgttgca
aatgatcatacagcccaactatgtcttcggatagttcagtggctagaaggtttagcctcc
aaagcccttgatttggaaaacaaggtgaggggttctcatgttggtacgtaccttcccagc
tctggaatttggcatcatactcaacggtttcttaagaaaggtgtctccaattcaaacact
gtccatcacttggatttcgatgctccaacacgtgaacatgctcctctgctacctgatgac
aaaaaacaagatgaatctcttctagaagatgtctggactctattaagggcaggaaggctg
gaagaggcttgtgacctttgccggtctgctggacaaccatggcgagctgcaactctatgc
ccatttggaggattggaccaatttccttctattgaaagcttgatgaagaatggaaagaat
agaactctgcaagccattgaacttgaaagtggcattggtaaccagtggcgcctttggaaa
tgggcttcctattgtgcatcagagagaatttctgagcaagatggtggaaaatacgaaaca
gctgtatatgctgcccaatgtagtaacctaaagcgcatgcttccaatctgtatgaactgg
gagtctgcatgctgggcaatggccaagtcatggcttgatattcaagtggatttagaacta
gctcgcttgcgacctggtggaactgatcaatttaaaaattatggagatattgttgatggt
agtcctggagaaggtgacagtgagtctcagtcttctgttggaccagaaaattggccattc
caagtcctgaaccaacaaccaaggcagctttctgctcttcttcagaaacttcattcaggt
gacacggtacatgaagctgtgactcgaggctgtaaggagcagcatcgacaaattgagatg
aatctaatggttggggatatcccacacttggtggacctcttatggtcatggatatcacca
tcagaagatgatcaaaatgtcttcaggcctcatggtgatcctcaaatgattcgttttggt
gcacatctagtgcttgtgcttagatatttacttgctgatcaaatgaaggattcttttaaa
gagaaaattatggctattggtgatctcattgtccacatgtatgcaatgtttttattttca
aagcaacatgaagagttggttggtatatatgcttctcagcttgcacggcaccgttgtatt
gacctctttgttcacatgatggaactcaggctgaatgccagtttgcatgtcaaacataaa
atcttcctttctgccatagagtacttgccattctctccaggggatgactcaaagggtact
tttgaagaaattatggacagtgttctgtcaagatctcgggaaatcaaacttggtaaatat
gataagtcatcagatgtagcagagcagcaccggctgcagagtcttcaaaaagctatggct
attcagtggctttgctttacacccccttctacaattactgatgctaaggctgtcagtgtg
aaacttcttctgcgggctctgatacacagcaacatattgttcagggagttttctctaatt
tctatgtggagggttccagcaatgccagttggtgcacacactttacttagtttccttgct
gaacctttgaagcagcctccagaaactcttcatgcatttgaggagtataatgttgctgag
aatttaaaagaatttcaagattggagtgaatactactcctgtgatgcaacatatcgcaat
tggctcaaaattgaatctgagattgctgaggttcccccccttgaactctcattggaggaa
aggcaaagagccattgcagcagccaaagaaacactaaattcatcactttcgttgctacta
cgaaaggaaaatccttggttggtttcagatgaaaataatatttatgaatcgatggaacct
gtattcctagaattgcatgcaactgcaatgctctgtctgccatctggtgaatgtatgtgt
ccagatgccaccttgtgcaccacattaataagtgcactgtactcctcagtgagcgaggaa
attgtgttgaatcgccagttaatggtgaatgtttccatctcaccaagggacaattactgc
attgagtttgttgttcgctgcttggcagtggagggtgatggacttggatcacatgaactc
tgtgatggtggtgttcttggtactgtgatggcagctggcttcaaaggggaacttgcacgg
tttcaagctggagttacaatagagatctcccgattagatgcctggtattcaagcaatgat
ggttctctcaaagggccagctacatacattgtgcaaggcctttgtcgtaggtgctgtctt
ccagaacttgctcttcgatgtatgcaggtttctgtttcactggtccagtcaggtgatcca
cctgaaaatcatgagttgattgaactagttgcctgccctgaaactgggtttgtccacttg
tttagtcagcatcagttgcaggaatttttattacttgagagggaatactcaatatacaaa
atggagcttcaggaggattctctgcttgaatcatag

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