Vitis vinifera (wine grape): 100243117
Help
Entry
100243117 CDS
T01084
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100243117
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100243117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
100243117
NCBI-ProteinID:
XP_059592628
LinkDB
All DBs
Position
5:join(444397..444660,445439..445765,445864..446153,446237..446465,446603..446950)
Genome browser
AA seq
485 aa
AA seq
DB search
MSDLAVFATLLLISTAEASNSRSHACGSAHAASPPRITSSAPAPAPALAPAPAFSAESPE
NDPAPDAAMIFDVTMYGAVGDGKTENGMAFLAAWDDACNHPGKSTLLVPNGTFFIGPISF
IGPCQNNQSPKVEIRGTLKAPSSLKAFPTPSWIMFRQLQSLILTGETTTNTSLFDAQGEE
SWRHADCRHKLKCQFPTSIILVNVTNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAP
WNSPNTDGVHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGK
YSAEKDVVGVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINVSNPIIIDQEY
CPWSTCTSSKCKGLSGPVDTTMGNVLSYHIHKQKISLTLLIYCSYFFLCAQPSLVKLSDI
HFTNIRGTFNTKSAVALMCSSSVPCEDIQLLNINLTHTMASSLQGGGHLSVKGALHRLEI
NGSSF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttagctgtttttgcgacccttttacttatttccactgcagaagcttcaaat
tctaggagccacgcctgtggctcggcgcatgcagcttccccgcctagaataacttcatca
gctccagctccagctccagccctagctccagctccagccttttccgctgaatcacccgaa
aatgatccggcacctgatgctgcaatgatatttgatgttaccatgtatggagcagtggga
gatggtaagacagagaatggcatggcattcttagcagcatgggatgatgcatgcaatcat
cctggaaaatccactttattagtacccaatgggacattcttcattggcccaatctcattt
attggcccttgtcaaaacaatcaatccccaaaggtagagatcagagggactttgaaggct
ccttccagcctcaaggccttccccacaccctcctggattatgttccgacaattgcagagc
ctgattctcactggagaaaccacaacaaacacatctttgtttgatgcccaaggagaagaa
tcatggagacatgccgattgcagacacaaactaaaatgccagttccctacatcaataata
ttggtcaatgttacaaatgggaatatcagcaacatcactctaaagaatggcaagggattc
catatgggcatcataaacagtgacaatgtcactgtccatggcgtcaacattacagccccc
tggaacagccccaacaccgatggcgtccacatcggttactccaccaacatccacatcact
tcttccacaattggagtcggagatgactgcgtctccattggacccggcagcatcaacata
actgttttcaacaccaaatgtggcccaggtcatggtatcagtgtggggagcctaggcaaa
tactcagctgagaaggatgtggtgggagtcagagtgaagaactgtacaatcaatggcacc
caaaatggggtcaggatcaaaacatggcccggatctccggcaagcaaggcgtctagtttt
tggtttgaggacattgtaatgatcaatgtctcaaaccccataatcatagatcaagagtac
tgtccctggtctacctgcaccagctccaaatgtaaaggtttatctggccctgtagacaca
acgatggggaacgtgttgtcatatcatatacacaaacagaaaatctctctaaccttactg
atctattgttcttatttttttctctgcgctcagccctcgcttgtgaagctcagtgacatt
catttcacgaacatcaggggcacttttaataccaagtctgcagtagctttgatgtgcagt
tctagtgttccttgcgaggatatacagcttcttaacattaatctgacccacacaatggca
agcagccttcaaggaggaggtcacttgagtgtgaagggtgctcttcatcgtctagaaatt
aatggttctagcttctga
DBGET
integrated database retrieval system
