Vitis vinifera (wine grape): 100243159
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Entry
100243159 CDS
T01084
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100243159
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100243159
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pel9A-like_beta_helix
YxzE
Motif
Other DBs
NCBI-GeneID:
100243159
NCBI-ProteinID:
XP_002266099
UniProt:
D7TDK7
A0ABY9BEN3
LinkDB
All DBs
Position
1:complement(join(7797672..7798082,7798187..7798295,7798473..7798554,7798866..7799073,7799273..7799308,7799403..7799570,7799728..7799856,7800033..7800329))
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AA seq
479 aa
AA seq
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MKRDKNPRLVFLLVFLVLIFTTLSITSVDARKHHSKKSRSHSKHHKHRSGNGNSAPDSEN
PPAPAPAPLPPYASYPPQSRIFDVLSFGAKGDGISDDSKALLAAWGAACKVPGATLEIPS
EFKFLIEPITLQGPCMPRLVLQIDGTLLAPPKVASWPKSSLFQWINFKWLHNFTIQGTGT
VDGQGSNWWSLSQIHYIQKRSKDIPNMKPTALRFYASYDVTVCNIRIINSPQCHLKFDYS
GRVNVTNITISSPENSPNTDGIHLQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINC
GPGHGISLGGLGKEKSAACVSNLVVDNISVQNALYGVRIKTWQGGIGSVKNVSFSNIQVS
DVKVPIMIDQYYCDKHICKNQTGAVAISGVTYNQIIGTYSVQPIHLACSNNVPCTDVDLI
DIQLNPSPRYRSFQQALCWNSYGKSQAPLVPSSIDYCLRRHSGSFMEIAKSHEIICQRS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagacaagaatccacgtcttgtttttcttttggtttttctggttctaatcttc
accacattgtctataacttctgtggatgccagaaagcatcacagcaagaagagcagatcc
cattctaagcatcataaacacagaagtggcaatggcaacagtgctcctgattctgaaaat
cctccagctcctgcgccagcccctcttcctccttatgcttcctatccgccccagtccaga
atttttgatgttttgtcctttggagctaagggtgatggaatctcagacgactctaaggca
cttctagcagcatggggagctgcctgcaaggtacctggggctactctagaaattccatca
gaattcaagtttcttattgaacccataacactacaaggcccatgtatgcctcgcctcgtt
cttcagatagatgggactctcttggctcctccaaaagtggcttcctggccaaaatccagt
ttgtttcaatggataaactttaaatggctccataacttcaccatccaaggtactggtact
gttgatggtcaaggttcaaattggtggagcctctcccagatccattatattcagaagaga
tccaaagacatcccaaatatgaaaccaactgccttgagattctatgccagctatgatgtc
accgtttgcaatatccgaatcataaacagccctcagtgccatctaaaatttgactactct
ggcagagtgaatgttaccaatatcacaatatcttcaccagagaacagcccaaacactgat
ggcattcacctgcagaacacccaagatgtggaaattcagcattccaatattggatgtgga
gatgactgtgtctccatacaaactggttgctctaacgtccatgttcatcatattaactgt
gggcctggacatggaataagcttaggaggactagggaaagaaaaaagtgcggcatgcgtc
tctaatctagttgttgataacatctcagtgcaaaatgcactatatggagtaaggatcaaa
acatggcagggtggtattggatctgtcaagaatgtgtcattttccaatattcaggtctcc
gatgtaaaggtgcctataatgattgaccagtactattgtgacaagcatatctgcaagaac
cagacaggagccgtggcaatatctggggttacatataatcaaataattgggacttattca
gtgcagcccattcatctagcttgcagcaacaatgtgccatgcactgacgtcgatctaatt
gatattcagttgaatccatccccaagataccgaagtttccaacaggccttgtgttggaac
tcttatggcaaatcacaagctccccttgttccttcaagcatagattattgcttacgaaga
catagtggttctttcatggaaatagctaaatcacatgagattatatgccaacgatcatga
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