Vitis vinifera (wine grape): 100243175
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Entry
100243175 CDS
T01084
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100243175
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100243175
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100243175
NCBI-ProteinID:
XP_010653553
UniProt:
F6HR11
A0ABY9CCS7
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All DBs
Position
8:complement(join(14362317..14363044,14363151..14363374,14363574..14363970,14364059..14364188))
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AA seq
492 aa
AA seq
DB search
MQMMSGDMFSIPSSIRTFAQDPDANPNNLKPPPKKKRNLPGTPDPDAEVIALSPKTLMAT
NRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVRKKVYICPEKTCVHHDPSRAL
GDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEERARITSVAATNLNFRNDSMNETVINPQPGLLNGFSGRGGPDAAGISQ
FCPGFGPDLTGLPEMVQVAASNLFGSSSVGNFGSCNESPWLDKSSATSNGANLSLASLPH
ALKEEEGNKGSMVETLTSLYSGNHSQQSSPAAPMSATALLQKAAQMGSTRSNPSFFGNSF
GVMNSSGSHSTTLNTLTHNRNELHQVFGTGKQHENLMATASLSEGVLAGSGLSSLTSTSN
NLAQMMMQTSGKQTEPVPLKLHLGSNSVENSLTRDFLGMGGGESGRPFLPQELAKFASMG
SAMGLSHFTSNH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgatgtctggcgatatgttctccatcccctcttccatcagaacctttgctcaa
gacccagatgcaaaccctaataatcttaaacctccgcccaagaagaagagaaatctacct
ggaaccccagatccagatgcggaggttattgctctttcaccaaagactctcatggccacc
aatcgattcatatgtgaaatctgcaataaagggtttcagagagaccagaacctgcaactg
caccgaagaggacacaatcttccatggaagctcaagcaaaggtcgaacaaagaggttcga
aagaaggtttacatctgccccgagaagacctgcgttcaccacgacccctccagagccctc
ggcgaccttactgggataaaaaaacatttcagtagaaaacatggcgagaagaagtggaag
tgcgagaagtgttctaagaaatacgcagttcaatctgactggaaagctcactcgaaaact
tgcggaaccagggagtacaaatgtgactgtggaacactcttttccaggaaagatagcttc
attacgcatagggctttctgtgatgccttggctgaagagcgtgctagaatcacttctgtt
gcagccaccaatctaaatttcagaaacgattccatgaatgagacggtgattaatcctcaa
cccggtttgttgaatggattttccggacggggaggtccagatgcggccggaatttctcaa
ttttgcccaggttttggaccagatttaacaggtttgcctgagatggtgcaagtggcagca
tcaaatctgtttggctcctcttctgtaggtaatttcggaagctgcaacgagtccccttgg
ctggacaagagttctgcaacgtcaaatggtgcaaatctctcactggcatctctcccacat
gctttaaaggaagaagaagggaacaaaggaagcatggtggaaaccctaacttctctctat
tccggtaaccacagccagcagtcaagtcccgcagctcccatgtcagccactgctctcttg
cagaaagctgctcagatgggttccacaagaagcaacccatccttcttcggtaacagcttt
ggagtgatgaactcatctggttcccattcaaccaccctcaatactctcactcacaataga
aacgagctgcaccaagttttcgggacgggtaaacaacatgagaatttaatggcgactgcc
tcattgagtgaaggcgtactggcgggttcaggcttgagctcattgacaagtacctcaaac
aatcttgctcagatgatgatgcagacaagtggaaaacaaaccgaaccagttccattgaag
cttcatctaggctcaaacagtgtggaaaatagcctcaccagggatttcctggggatggga
ggaggtgaatcaggtcgtccattcttgccccaagagctagccaaatttgcttcaatgggc
tcagccatggggttgagccatttcaccagcaaccattga
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