Vitis vinifera (wine grape): 100243197
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Entry
100243197 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100243197
KO
K24741
WD repeat-containing protein 20
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
100243197
Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100243197
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
Cytochrom_D1
Beta-prop_WDR75_1st
Pep3_Vps18
Beta-prop_Vps41
PP2C_2
Motif
Other DBs
NCBI-GeneID:
100243197
NCBI-ProteinID:
XP_002280841
LinkDB
All DBs
Position
8:complement(join(14203710..14204123,14205219..14205311,14205399..14205504,14205734..14205821,14205915..14206011,14208017..14208100,14208203..14208290,14216177..14216270,14216360..14216468,14216558..14216872,14217159..14217335))
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AA seq
554 aa
AA seq
DB search
MINTTNGMMSPSSSSATNNAQSPGLKTYFKTPEGRYKLHYEKTHPAGLLHYGHGKTVTQV
TLAHLKDKPVSASPPAPPSSYSTGGGVRSAAARFLGGSNGSRALSFVGGNGGSKSVSGNG
RIGSIGVSSLSNPTGTSNFDGKGTYLIFNVGDAIFICDLNTQDKDPIKSIHFSNSNPVCH
AFDPDAKDGHDLLIGLNSGDVYSVSLRQQLLDLGKKLVGAQHYNKDGCVNSSRCTSIAWV
PDGDGAFVVAHADGNLYVYEKSKEGAGDSSFPVIKDQTQFSVAHARYSKSNPIARWHICP
GSINGVTFSTDGAYIATVGRDGYLRVFDFSREQLICGGKSYYGALLCCAWSVDGKYILTG
GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDPFWSPPNSDGTGENIVYRFGSVGQDTQ
LLLWDLEMDEIVVPLRRCPGGSPTFSTGSQSSHWDNACPVGTLQPAPSIRDVPKLSPLVA
HRVHTDPLSGLMFTQESVLTACREGHIKIWTRPGVAEIQSSNSEALLSTSSKDKQLLLSG
KVGGNGYKQNNHQV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacaaccaacggcatgatgtcaccgtcttcctcctcagcgactaacaacgcg
caatctcctggtctcaagacctacttcaaaaccccagaaggccgttacaagcttcactat
gagaagacccatcctgctggtcttcttcactacggccatggtaaaaccgttactcaggta
accctagcgcatctcaaggataagccggtgtcagcatccccgccggctccaccttctagc
tatagcactggcggtggagtgagatcagcggcagccagattcttaggcggcagcaatggg
agccgagcccttagttttgtcggagggaatggtggcagtaagagtgtcagtggaaatggt
aggatagggtcaattggggtttctagtttgagtaatccgacaggtacttccaattttgat
gggaaagggacttacttgattttcaatgttggggatgcaatatttatctgtgatttgaat
acgcaagataaggatcccataaagtctatacattttagtaattcgaatcctgtttgtcat
gcatttgacccggatgctaaggatggacatgatttgcttattgggttgaattctggagat
gtctactcagtgtcattgaggcagcaattactagatcttgggaagaagcttgttggggcc
cagcattataacaaagatggttgtgttaatagcagccgttgtactagcattgcatgggtc
cctgatggtgatggtgctttcgttgttgctcatgctgatggaaatttgtacgtgtatgag
aagagcaaagaaggtgcaggtgattcatcatttcctgttatcaaggatcaaactcaattt
tctgttgcacatgcgcgttatagtaagagtaacccaattgccagatggcatatttgccca
ggttcaattaatggtgttactttctcaactgatggagcctatattgcaacagtcggaaga
gatggttatctgagagtgtttgacttctcaagagaacaacttatatgtggtggcaaaagc
tattatggtgctctattatgttgtgcttggagcgtggatggaaaatatattttgactgga
ggtgaggatgatctagttcaagtttggagtatggaagatcggaaggttgtggcatggggt
gagggacacaactcttgggtcagtggagtggcttttgatccattttggtcaccgccaaat
tcagatggcacgggggaaaatattgtgtatcgttttggttctgttggtcaggacacacag
ttacttctatgggacctggaaatggatgagattgtagtgccacttcgcagatgtcctggt
gggtccccaactttcagtaccggaagccaatcatcccattgggacaatgcatgcccagtg
ggtactctgcaaccggccccaagtatccgagatgttccgaagctatccccacttgttgct
catcgtgttcataccgatcccctgtccggcttgatgtttactcaggaatctgtccttaca
gcctgccgagaggggcacataaagatttggacgagacctggggttgctgaaatccagtca
agcaactctgaagcccttttaagtaccagttcaaaggacaaacaattattattatccgga
aaagttggtggtaatggttacaaacaaaacaatcatcaggtatga
DBGET
integrated database retrieval system
