KEGG T01084: 100243262

Vitis vinifera (wine grape): 100243262

Entry

100243262         CDS       T01084

Name

(RefSeq) cell division cycle 5-like protein

K12860

pre-mRNA-splicing factor CDC5/CEF1

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100243262
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100243262
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100243262
Spliceosome [BR:vvi03041]
Complex B
  Other components
   Prp19 complex
    100243262
Complex C
   Prp19-CDC5 complex
    100243262
DNA repair and recombination proteins [BR:vvi03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100243262

SSDB

Motif

Pfam:

Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 C45G9_C TPR_HPS5_insect

Other DBs

NCBI-GeneID:

100243262

NCBI-ProteinID:

XP_010660227

UniProt:

A0ABY9D703

LinkDB

Position

14:join(10267240..10267416,10273218..10274945,10288942..10289223,10290233..10291084)

AA seq 1012 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDGRHRKRKRKGIDYNAEIPFEKKPPPGFFDVTDEERLVEQPKFPT
TIEELEGKRRVDVEAQLRKQDVAKNKIAQRQDAPSAILQANKMNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLLAGNEELTEGSGATRALLANYSQTPRQGMTPLRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRRDVQTPNLMLTPSATPGG
VGSTPRISMTPSRDAHSFGITPKGTPIRDELHINEDMDMHDSAKLELRRQADLRRNLRSG
LGSLPQPKNEYQVVIQPIPEDNEEPEEKIEEDMSDRLARERAEEEARQQALLRKRSKVLQ
RELPRPPVASLDLIRNSLMRADEDKSSFVPPTLIEQADEMIRKELLGLLEHDNAKYPLDE
KTEKEKKKGGKRSANGKSAGSVPDIEDFEEAELKEADNLIKEEVQFLRVAMGHDNESLDE
FVEAHKTCLNDLMYFPTRDAYGLSSVAGNMEKLAALQNEFDNVKKRMEDDTKKAQRLEQK
IKLLTHGYQMRAGKLWTQIEATFKQMDTAGTELECFQALQKQEQLAASHRINGLWEEVQK
QKELEQTLQSRYGDLIAEQERIQSLINEYRVQAKIQEEIAAKNHALELAEAEMCQMDVEN
PEPAAADELGNSVQVDPSHGGLPDQKMDSSQEEYHTSPKHDADADADAANHITVAGLETP
DAVAASDVLGNSFPADPSHDEMPGQKLDAAEGEAHASPNPDVNVGAENETIVPDTETAEP
VCPSDELGKSMPVGSSRDGTPNDQMGAVQAEAYASTKLDGDVGAEAQDGGGS

NT seq 3039 nt +upstreamnt +downstreamnt
atgaggataatgataaagggaggcgtgtggaagaacacagaggatgaaattctgaaagcg
gcggtgatgaagtatgggaagaaccagtgggccaggatctcttctcttctcgttcgcaaa
tcggccaagcagtgcaaggctcgctggtacgagtggcttgacccttctatcaagaagact
gaatggaccagagaagaagatgagaaactacttcatcttgccaagctcatgccaacacaa
tggagaacaattgctcccattgttggacgtactccttctcagtgccttgagcgttatgaa
aagctccttgatgcagcctgtgtcaaggatgagaactacgaacccggagatgacccgcgt
aaactgcgtcctggagagattgacccaaacccagaatcaaagcctgcccgtccagatcct
gttgatatggatgaggatgagaaggaaatgctttcagaagctcgagctcggttagccaac
acgagaggtaagaaggccaaaagaaaagctagagaaaagcagcttgaagaagccaggagg
ctcgcgtctttgcagaaaaggagagaacttaaggctgctggaattgatggtagacatcgt
aagaggaaaaggaaaggaatagattacaatgcggaaatcccctttgagaagaagccacct
ccaggcttttttgatgtcactgatgaagaaaggctagttgagcagcccaagtttcctacc
accattgaagaacttgaaggcaaaagaagggttgatgtagaagcacaattaagaaaacag
gatgttgcaaagaataaaattgcacaaagacaagatgccccatcagctatattgcaagcc
aataagatgaatgacccagaaacagttaggaaaaggtcaaaactgatgcttcctgcccca
cagatttcagaccatgagttagaggaaattgcaaagatgggttatgctagcgatcttctt
gctgggaacgaggagctcacagaagggagtggggcaacacgtgctcttcttgcaaattat
tcccagacaccacgacaggggatgactcctttacgaaccccacaaagaacaccggctggt
aagggtgatgctatcatgatggaagcagaaaacttagctagattgagagaatcacagaca
ccattattaggaggagaaaatcctgagttgcacccttcagatttttcaggggtcaccccc
aaaagaagggacgtccaaacgccaaatctaatgctgactccttctgcgactcctggaggt
gtgggctcgactcctagaattagcatgactccatcaagggatgcccattcttttggtata
accccaaaaggaactcccattagagatgagctccacattaatgaagatatggatatgcat
gatagtgcaaaacttgagctccggaggcaggctgatctaagaaggaacttacgttctggt
ttaggcagtcttccacagcccaagaatgagtaccaagtagttatccaacctattccagaa
gataatgaagaaccagaggagaagatagaagaagatatgtctgataggctagctagagaa
agggctgaggaggaagccaggcagcaggcattacttaggaagagatcaaaagtactgcag
agagagctccctagacctcctgttgcttcattagacctcattagaaattctctgatgagg
gctgatgaagacaagagttcctttgttcctcctacgttgattgagcaggctgatgaaatg
ataagaaaggagctgcttggcttacttgagcatgataatgcaaagtatccacttgatgaa
aaaacagagaaggagaaaaagaaaggaggcaagcgctctgcaaatggaaaatctgctggt
tctgtccctgacatagaagattttgaagaagctgaactaaaagaggctgacaatttgata
aaggaggaagttcagtttctccgtgtggcaatgggacatgataacgaatcacttgatgaa
tttgttgaggcacacaaaacatgcttaaatgacctgatgtacttccctactcgtgatgct
tatggtctgtcaagtgttgctggaaacatggagaaacttgcagccctgcagaatgaattt
gacaatgtgaaaaagaggatggaggatgatactaagaaggcacaacgccttgagcagaag
ataaaacttcttacgcatggttatcagatgcgggctggaaaactgtggacacaaattgag
gcaactttcaaacagatggacactgctggaacagaacttgagtgtttccaagctttgcaa
aaacaagagcaactagcagcatcacacaggatcaatggtctttgggaggaagttcagaag
cagaaggagcttgaacagactttacagagtcgctatggggatcttattgcagagcaggaa
agaatccaatctctcattaatgaatacagagtacaagcaaaaattcaagaagaaattgcg
gcaaagaatcatgctcttgagttggctgaggctgaaatgtgccaaatggatgtagaaaat
cctgagcctgcagctgcagatgagcttgggaactctgtgcaagttgatccatctcatggt
ggattgccagaccagaaaatggattccagccaagaagaatatcatacaagcccaaaacat
gatgcagatgctgatgcagatgcagctaatcatattactgtggctggcttggaaactcct
gatgctgtagccgcttcagatgtgcttggaaattcctttccagctgatccatctcatgat
gaaatgccaggccagaaactggatgctgctgaaggggaagctcatgcatccccaaatcct
gatgtgaatgttggtgcagaaaatgaaacaattgtaccagacacagaaactgctgagcct
gtatgcccgtcagatgagcttggaaaatctatgccagttggctcatctcgtgatggaact
ccaaatgatcaaatgggtgctgtccaagcagaagcttatgcaagtacaaaacttgatggg
gatgttggtgcagaggcccaagatggtggaggatcgtag

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