Vitis vinifera (wine grape): 100243265
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Entry
100243265 CDS
T01084
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100243265
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100243265
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100243265
NCBI-ProteinID:
XP_010663062
UniProt:
A0ABY9DMP2
D7SHE0
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Position
17:complement(join(12083318..12083539,12083635..12083773,12083934..12084674,12084780..12084889))
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AA seq
403 aa
AA seq
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MASSSLSLFFLFSLLSPILIASSPVQDPELVIQEVHRSINESRRNLGYLSCGSGNPIDDC
WRCNANWEKNRQSLADCAIGFGKNAIGGKNGKIYVVTDSSDDDVVNPKPGTLRYAVIQDE
PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGLNIHDCK
QGGNTNVRDSPSHYGFRTISDGDGVSIFGGSHIWVDHCSLSNCHDGLIDAIHGSTAITIS
NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSADPTINSQGNRFLAPNDRFSKEVTKHEDAPESQWKNWNWRSEGDLMLNGAYF
TPSGAGASSSYARASSLGARPSSLVASITGSAGALSCKKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctagctcttcactttccctcttcttcctcttctctctcctgtctccaattctcatt
gcctcctctccggttcaggaccctgaactggtgatacaagaagtacataggagcatcaat
gagtcaaggaggaacttggggtatctgtcttgtgggagtgggaaccccattgatgactgc
tggaggtgtaacgccaattgggagaagaaccggcagagcctggctgattgtgcaattggg
tttgggaagaatgccataggtggcaagaacggaaagatttacgtggtcacagactccagt
gatgatgatgtggtgaatcctaagccggggactcttcggtatgcagtcatccaagatgag
cccttgtggatcatctttgctcgggacatggtgattaagttgaaggaagagttgatcatg
aactccttcaagaccattgatggcaggggagctagtgttcacattgcaggtggaccatgc
attactatacagtttgtgaccaacattatcatacatggactcaacatccatgactgcaag
caaggagggaatactaatgttagagactccccaagtcactacgggtttaggacgatatca
gacggtgatggggtgtccatctttggtgggagccatatctgggtggaccactgctcactc
tcaaactgccatgatggactcattgatgccatccatggctccactgccatcactatctca
aacaattacatgactcaccatgataaagtcatgcttttgggccacagtgattcctacact
caggacaagaacatgcaagtcactatagccttcaatcactttggagaagggcttgtccaa
agaatgccaagatgtagacatggatacttccatgtggtaaacaatgactacacccattgg
gaaatgtatgccattggagggagtgctgacccaaccatcaacagccaaggcaataggttt
cttgcacccaatgatagattcagcaaagaggtgaccaaacatgaggatgcaccagaaagt
caatggaagaactggaattggaggtcagagggagacttgatgttaaatggtgcatatttc
acaccatcaggggcaggagcctcatcaagttatgccagggcatcaagcttgggggcaaga
ccatcttccttggtggcttccatcactgggtcagcaggtgcacttagctgcaagaaaggt
tctcgatgctga
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