Vitis vinifera (wine grape): 100243302
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Entry
100243302 CDS
T01084
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100243302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100243302
03021 Transcription machinery [BR:
vvi03021
]
100243302
Transcription factors [BR:
vvi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100243302
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100243302
RNA polymerase III system
TFIIIB
100243302
RNA polymerase I system
SL1/TIF-1B
100243302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
100243302
NCBI-ProteinID:
XP_002285755
UniProt:
A0A438EME8
LinkDB
All DBs
Position
6:join(371469..371545,372339..372426,372784..372855,375191..375241,375427..375471,375598..375690,376149..376250,376361..376434,376912)
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AA seq
200 aa
AA seq
DB search
MADQVLEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagttttggaagggagccaaccggtggatctctccaagcatccatctgga
atcatacccacgctccagaatattgtgtctacagtcaacttagattgcaaattggatctc
aaggccattgcattgcaagctcgaaatgcagaatacaatccaaagcgttttgctgccgta
atcatgaggataagggacccaaaaaccacggctttgatatttgcttctggaaagatggtt
tgtactggagccaagagtgaacatcagtccaagttggcagctcgaaagtatgctcgaatt
attcagaagctcggttttccagctaaatttaaggattttaagattcagaacatagttggc
tcctgtgatgttaaattccccataaggcttgaaggccttgcatattctcatggtgccttt
tccagctatgaaccagaattgttccctggcttgatctatcgaatgaaacaaccaaagatt
gtgctgcttatctttgtgtcagggaaaattgttctcactggagctaaggtgagagatgag
acatatacagcgtttgagaacatataccctgtccttactgagttccggaagaaccaacaa
tga
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