Vitis vinifera (wine grape): 100243338
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Entry
100243338 CDS
T01084
Name
(RefSeq) pumilio homolog 2 isoform X2
KO
K17943
pumilio RNA-binding family
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
COG5_C
Motif
Other DBs
NCBI-GeneID:
100243338
NCBI-ProteinID:
XP_002283191
UniProt:
F6GUZ1
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All DBs
Position
6:join(6057882..6058505,6062373..6063964,6064051..6064192,6064323..6064430,6069474..6069686,6069911..6070021,6072024..6072218,6072808..6072982,6073550..6073587)
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AA seq
1065 aa
AA seq
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MLSELGRRPMLKNGDGSFGDDLEKDIGLLLREQRRQEADDYEKELNLYRSGSAPPTVEGS
MNAVGGLFGGGAAFPGFPDDGNGNGFASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKE
DWRFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGRSMYSMPPGFNSRKEETEADSEKLCGS
AEWGGDGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSV
EAELGHLRRELKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPDPQLIA
RAPSPCLTPIGGGRTAISEKRGINGSSSFNSVPPSMNESADLVAALSGMDLSTNGVIDEE
NHLPSQIEQDVENHQSYLFNLQGGQSNIKQHSYLKKSESGHLQIPSAPQSGKASYSDSVK
SNGVGSELNNSLMADRQAELHKSSVPSGNSYLKGSSMSSHNGGGGLPSHYQQFVDSTNSS
IPNYGLGAYSMNPALASMMASQLGAANLPPLFENVAAASAMGVPGIDSRVLGAGLASGPN
IGAATSESQNLNRIGNHMAGNALQAPFVDPMYLQYLRTAEYAAAQVAALNDPSVDRNYLG
NSYVDLLGLQKAYLGALLSPQKSQYGVPLGSKSSGSNHHGYYGNPAFGVGMSYPGSPLAS
PVIPNSPIGPGSPIRHNDLNMRYPSGMRNLAGGVMAPWHLDAGCNMDEGFASSLLEEFKS
NKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFG
NYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYGCRVIQKAIEVVDPDQKIKMVEELD
GHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCR
DPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKF
ASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRE
LILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQSPHPA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgaattggggaggaggccgatgctcaaaaacggtgacggatcgtttggggat
gatttggagaaggatatagggttgttgcttcgtgagcagcggcgtcaagaggcggatgat
tatgaaaaggagctaaatttgtatagaagtgggtctgctccgccaactgttgagggttct
atgaatgcagttgggggtttgttcggtggtggagctgcctttccgggatttccagatgat
gggaatgggaatgggttcgcgtctgaggaggagcttaggtctgatccagcttacctttct
tattactattcaaatgtgaatttgaacccacggctcccacctccattgctttccaaggag
gattggaggtttgctcaaagactgaaaggagggagttctggattgggagggattggagat
agaaggaaaatgaatagaaatgatagtggtagtgttggtagatcgatgtattcgatgcca
ccagggtttaattcgcggaaagaagagactgaggcagactcagagaaactttgcggttca
gcagagtggggtggcgatggactcatcgggttgtcagggttaggactagggagcaaacag
aagagtcttgcagaaatttttcaggatgatttagggcgcaccactcctgtctctggacac
ccttctcgtccagcaagccgcaatgcttttgatgaaaatgctgaacccttgggctctgtt
gaagcggagttgggtcatttacgccgtgaattgaaatctgctgatgttttacgatccggt
gcaagtgttcagggctcatcaacggtccaaaatattggtgcacctacttcatatacttat
gcctctgtgttgggtggttccttatcaagaagcactactcctgatccccaactcattgct
agggctcctagcccctgtcttacacccattggaggagggagaactgccatttctgaaaag
agaggaattaatggttctagctcttttaatagtgtccctcctagcatgaatgaatctgca
gatctggtggctgctttgtctggtatggatctgtcaacaaatggcgtgattgatgaagaa
aatcatttgccatcacagattgaacaggatgttgagaatcatcaaagctatctcttcaat
ctacaaggtggtcagagcaatattaagcaacattcatacctgaagaaatctgaatctggg
catttacaaattccttctgctcctcagtcaggaaaggcatcatattctgattcagttaag
agcaatggtgttggttcagagctgaacaactccttgatggctgataggcaagctgaatta
cacaaatcttctgttccctccggtaattcgtacttgaaaggatcatctatgtctagtcat
aacggtggaggtggcttgccttctcattatcagcagtttgtagatagcacaaattcatca
attcctaactatggtttgggtgcatattccatgaatccagctttggcttccatgatggca
agccagcttggtgcggctaatttgccaccattatttgaaaatgtcgctgcagcatcagct
atgggagtccctgggattgattcaagagttttgggagcaggcttggcttctgggccaaat
ataggggctgctacatcagagtcacagaatctcaatagaattgggaatcacatggcaggg
aatgctcttcaagcaccttttgtggatccaatgtatcttcaatatttgaggacggctgaa
tatgctgcagcacaagttgctgctcttaatgatccctctgtagataggaactacttaggt
aattcgtatgttgatttacttggactccagaaagcttatctgggagctctgctttctcct
cagaaatcacagtatggtgttcccttgggcagtaaatctagtggttctaatcatcatggt
tactatggtaacccggcatttggtgttggcatgtcataccctggaagtcccctagcaagt
cctgttattccaaattctcccattggaccaggaagtcctatcagacacaatgatctcaat
atgcgatatccatctgggatgagaaacttagctgggggagtcatggcaccctggcacttg
gatgctggttgcaacatggatgaaggctttgcctcctcactacttgaagagttcaagagt
aacaaaaccaaatgttttgagctttcagaaattgctggtcatgttgttgagtttagtgcg
gaccagtatggaagccgattcattcaacaaaaacttgaaacggccacaacagaagagaaa
aacatggtttaccaggaaatcattccccaagctctctctttgatgacagatgtgtttggt
aactatgttatacaaaagttttttgagcatggactagtatcccagagaagagaactggct
ggcaagctttatggtcatgtactgacacttagccttcaaatgtatggttgtcgagtgatc
caaaaggcaatagaagttgttgatccagaccaaaagattaaaatggttgaggagcttgat
ggtcatatcatgcgatgtgtgcgtgatcagaatggaaaccatgtcatccaaaagtgtatt
gaatgtgttcctgaagatgctattcagtttatcatctcaacattctttgatcaggttgtg
accctctcaacccatccatatgggtgtcgtgtgatacagagagttctggagcactgcagg
gatccaaaaacccagagtaaagtgatggatgagattttaggatctgttagcatgctggca
caagatcagtatggcaattatgttgttcagcatgttctggagcatggacaaccacacgag
cgctctgctataattaaggaattagctggaaagatagttcagatgagtcagcagaagttt
gcctccaatgttgtggagaagtgtttaacttttggcggtcctgctgagcgccagatcctg
gtgaatgagatgcttggcactactgatgagaatgagcctcttcaggctatgatgaaagat
cagtttgcaaactatgttgtacaaaaggtgctggagacttgtgatgaccagcagcgtgag
ctgatcttgtcccgaattaaggttcatcttaatgcactgaagaaatacacttatggaaag
catattgttgcacgtgtagagaaactcgttgctgctggggaaaggagaattgctattcag
tctccacaccctgcttag
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integrated database retrieval system
