Vitis vinifera (wine grape): 100243346
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Entry
100243346 CDS
T01084
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100243346
03021 Transcription machinery [BR:
vvi03021
]
100243346
Transcription factors [BR:
vvi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
100243346
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
100243346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
100243346
NCBI-ProteinID:
XP_002273198
UniProt:
F6HUS4
LinkDB
All DBs
Position
2:join(1004969..1005433,1005853..1005978,1006061..1006332,1006466..1006571,1006675..1006740,1006822..1006992,1007076..1007176,1007262..1007346,1007442..1007567)
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AA seq
505 aa
AA seq
DB search
MAETVIEIPMAVPIKKARTSRKALKEKSSSTNKANILAGQISESSPAPVPTPSEDAGKEN
HESLSQPLSGKKKSKGAQKGKKSKESQSFERDLQEMQEKLEQLRLEKEKTEELLKARDEM
LKIKEEELETRGREQEKLQMELKKLQKLKEFKPTVTFPLHSLRDKEQEKKEKNKKGCPET
KRPSPSYVLWCKDQWNEAKKANPDADFKEISNILGAKWKTISAEEKKPYEEKYQAEKEAY
LQIVGKEKRENEAMRLLEEEQKQKTAMELLEQYLQFKQGAEKENKKKKKEKDPLKPKHPV
SAFFLFSKERRAALLGEDKNVLEIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQEEMEL
YKQQKDEEAEDLKKGEEEQMKIQKHEALQLLKKKEKTENIIKKTKENRQKKKKQKEKANS
DPNKPKKPASSFLLFSKEARNSFLQERPGINNSTLNALISVKWKELDEEERKIWNDKAKE
AMEAYQKELEEYNKSAATISDKPQQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctgagactgttattgaaatccccatggctgttccgataaagaaggcaaggaccagc
aggaaggcgctgaaggagaagagctcttcaacgaataaggcaaacatcttggccggacag
atctcagagtcctctccggcgccagttccgacgccgtctgaggacgccggaaaggagaac
cacgagagcctgtcacagcctctgtccgggaagaagaagagtaaaggggctcagaaaggg
aagaaatcgaaggagtcccagtcgtttgagagggacttgcaagaaatgcaggaaaagctt
gagcaattgcggcttgagaaggagaagacggaggagttattgaaggctagagacgagatg
ttgaagatcaaggaggaagagctcgagacaaggggtcgagagcaggagaagcttcagatg
gagttgaagaaattgcagaagttgaaggagttcaaacccaccgtgacatttccacttcac
tctctgagagataaagaacaagaaaagaaggagaagaacaaaaagggctgcccagaaacg
aaaaggccatctccgtcatatgtactctggtgcaaggatcagtggaatgaggccaagaaa
gcaaaccccgatgcagacttcaaggagatctcaaatattttgggggctaaatggaagaca
atcagcgcagaagagaagaagccatatgaggagaagtatcaggctgagaaggaagcctat
ttgcagatagtggggaaggagaagcgcgaaaatgaagccatgaggctgttggaagaggag
cagaagcagaagacagctatggagttgcttgagcaatatctccagttcaaacagggagca
gaaaaggagaacaagaagaaaaagaaagagaaggacccattgaaaccgaagcatcctgta
tcagcattttttttgttctcaaaggaaaggcgagcagctctgcttggagaggataagaat
gttttagagattgccaagattgctggtgaagagtggaagaacatgacggagaagcagaaa
cgcccttacgaagagattgcaaagaaaaataaggcaaagtatcaggaagaaatggagttg
tacaaacagcagaaggatgaagaagctgaagatctcaagaagggagaggaggagcagatg
aaaatccagaaacatgaagcattacaactgctcaagaagaaagaaaaaaccgaaaatata
atcaagaaaaccaaggagaatcgccagaagaagaagaagcagaaggaaaaggccaactct
gatccaaacaagcctaagaagccggcatcctcattcctcctattcagcaaagaagcaagg
aatagtttcctgcaagagcgaccaggaataaacaattccaccctcaatgctctgatttca
gtgaaatggaaggagttggatgaggaagagaggaaaatctggaatgacaaagctaaggaa
gctatggaagcataccagaaggaactagaggaatataacaagtctgctgcaaccatatct
gacaagccacagcaatga
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integrated database retrieval system
