KEGG   Vitis vinifera (wine grape): 100243351
Entry
100243351         CDS       T01084                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100243351
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vvi01009]
    100243351
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100243351
   03036 Chromosome and associated proteins [BR:vvi03036]
    100243351
Protein phosphatases and associated proteins [BR:vvi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     100243351
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     100243351
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     100243351
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_EML
Other DBs
NCBI-GeneID: 100243351
NCBI-ProteinID: XP_010663144
LinkDB
Position
17:join(10441711..10441801,10457365..10457468,10457667..10457774,10457873..10457992,10467087..10467275,10467381..10467472,10467738..10467856,10468317..10468440,10468540..10468663,10469249..10469317,10473212..10473303,10473438..10473515,10474475..10474551,10474943..10475079)
AA seq 507 aa
MTLTTDSSSSLQWKFSQAFGERAPGEDVQDIDMISAMEFEKSGDYLAVGDRGGRVVVFER
KDEKDSLNQWHSRNELEQLDFTTIQHPIFHYKTEFQSHEPEFDYLRSLEIEEKINKVRWC
ATPNESLFILSTNDKTIKLWKVKDHKPKKVKELNPNPFVHSENVLLAESSFVSGQDKPSV
ANGYALEWTEKIDNMSPSQDTHAKRANIGETVSARCRKVYAHAHDYNINSISNNSDGETF
VSADDLRINLWNLEISDQCFNIIDMKPSNMEDLTEVITAAEFHPIHCNLLAYSSSRGFIR
LVDLRQSAICDHNARILQHGESSGLKSFFTEIVSSISDIKFASDGRHLLSRDYMNLKLWD
IRMETSPVAIFKIHEHLRPKLCDLYNNDAIFDKFECCLSGYGLHFATGSYSNLLRIFSYG
VGSEEGITMEASRNPNRKSHLQAAPKARRSSISNLTRGFSRQANENLSSGSNELSCNLSS
KLLHLAWHPTTKFIACAAGNSLYMYYA
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgactctcactacggactcttcctcttccttgcaatggaagttttctcaggctttcggc
gaacgagctcctggagaagacgttcaagatattgatatgatatcagcaatggaatttgag
aagagtggtgattacctggctgttggagatcgaggtggtcgggttgtagtatttgaaagg
aaggatgagaaagatagtttaaatcagtggcattctcgaaatgagttggagcaattggat
tttactaccattcagcatcccatatttcattataagactgaatttcagagtcatgagccc
gagtttgattatttaaggagcttggaaattgaagagaagattaacaaagtaagatggtgt
gcaacacccaacgaatcactatttattctttcaacaaatgacaagacaattaaactgtgg
aaggtaaaggatcataagccgaagaaagtaaaagaattgaaccctaatccattcgtgcat
tcggagaatgtgcttttggctgaaagtagttttgtgagtgggcaagataaaccatctgtt
gctaatggttatgctttagagtggacagaaaaaatagataacatgtccccatctcaagac
acgcatgcaaagagagctaatattggagagactgtctctgcaagatgtcggaaggtgtat
gctcatgctcatgattataatattaattctatctcaaataatagtgatggtgagacattt
gtttctgcggacgaccttaggataaacttgtggaacctggagatcagtgatcaatgtttt
aatatcattgacatgaaaccatcaaacatggaagatcttactgaggtgataacagcagct
gagttccatccaattcactgtaatctgctggcatatagcagctcaagaggttttattcgg
ctagttgacttgcgacagtcagcaatatgtgatcacaatgcaagaatattacaacatgga
gagtccagtgggcttaaatcgttttttacagaaatcgtctcatctatctcagacattaag
tttgcatctgatggaaggcatctcttaagtcgtgattacatgaatctaaagctatgggat
atacgcatggagacttcaccagttgcaatttttaagattcatgaacatcttcgccctaag
ttatgtgatttgtacaataatgatgccattttcgataaatttgagtgctgcttaagtgga
tatggacttcattttgctacgggatcttacagtaatcttttacgtattttctcctatgga
gttggaagcgaagaaggaatcacaatggaagctagcagaaatcctaacaggaagtcacat
ctccaagctgctccaaaagctagaaggtcatcaataagcaacctaacacggggatttagc
agacaagcaaatgaaaatttgagctcaggtagtaatgagctttcttgtaacttgagctcc
aagctgctacatctggcatggcatccaacaacaaagttcattgcttgtgctgcagggaat
agcttgtatatgtattatgcctag

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