KEGG   Vitis vinifera (wine grape): 100243393
Entry
100243393         CDS       T01084                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100243393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100243393
   03041 Spliceosome [BR:vvi03041]
    100243393
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100243393
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100243393
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100243393
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRN3
Other DBs
NCBI-GeneID: 100243393
NCBI-ProteinID: XP_019077217
UniProt: F6HMU3 A0A438D4I5
LinkDB
Position
8:complement(1015711..1017102)
AA seq 463 aa
MVKKRKLEPKIVEPPPPQEVEEEAEEIEEDEEVEEEEYEEVEEEEDEEEEEGGGTQNAAK
KSASTSAVDDDDDEEPIQKILEPFSKDQLINLLREAAEKHADVAERLRRVADEDPVHRKI
FVHGLGWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQPQ
KKIGNRMTACQLASIGPVPSPAVGQAAMSVSAAQSVSEYTQRKIYVSNVGAELDPQKLLV
FFSKYGEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDEPHKNFDGHILHCQKAIDG
PKPGKQQQLQQQQHHHNLPNTHYTKSEITNFMGPQGHLMAPSGPPAIPYNQGSAAQALNP
ALGQALTALLATQGAGLGLTNLLGTLGSASVGAAVNPSVAGAGHGMQGGYPNQAVAGNIS
SGMVGGYGSQGAYGNQQMGQGSSSGRSQHGVGHMGGMAPYMGH
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggtgaagaagcgaaagctcgagcccaaaatcgtcgagccaccaccaccgcaagaggtt
gaagaggaagcagaggagatagaagaagacgaagaagttgaagaggaagagtacgaagag
gtcgaagaggaagaggacgaagaagaggaggagggtggtggcactcagaatgctgcgaag
aaatctgcgtcgacgtccgccgttgacgacgacgacgacgaggagccgattcagaagatt
ttggagccgttcagcaaggatcagttgatcaatttgcttcgtgaagctgcggagaagcat
gcggatgtggcggagaggttgaggagggtggccgatgaggatccggtgcataggaagatc
ttcgtgcacgggcttgggtgggacacgaatgcggaaacccttattagtgtgttcaaagac
tacggtgagatcgaggattgcagagcggtgtgcgataagctgtctgggaaatcgaagggg
tatgggttcattctgttcaagactcggagcggggctcggaaggcgctgaagcagccgcag
aaaaagattgggaaccgaatgacagcgtgccagcttgcttcgattggtccagtgccgtct
ccggcggtggggcaagctgccatgtctgtatcggcagcccagtcggtgtcggagtataca
cagaggaagatatatgtgagcaatgtgggagcggagttggatccgcagaagttgttggtg
ttcttttcgaagtatggagagattgaggaggggccgttagggctagataagcagacaggt
aagccaaaggggttctgtcttttcgtgtacaaaacggcggagggtgcaaagaaggcattg
gatgagccgcacaagaactttgatgggcatattttgcattgccagaaggccattgatggt
ccgaaaccgggtaaacaacaacagctacagcagcagcagcatcaccataacctgccgaac
acccactacacaaagagtgaaatcactaattttatggggcctcaagggcatctcatggcc
ccatcggggccacctgctataccctataatcaggggtctgcagcacaagctctcaaccct
gcgctagggcaagctttgacagcattgcttgcgactcagggtgctgggttgggcctgacc
aacctgcttggcacgctgggttcagctagtgttggggcggcagtgaacccgagtgtggct
ggtgcaggacatggaatgcagggtgggtatccaaaccaggcggtggctggtaatattagc
tcaggaatggttggaggttatgggagtcagggggcctatgggaaccagcaaatggggcag
ggaagttcgagtggtaggtcgcagcatggtgttgggcacatgggcggcatggctccttac
atgggtcattag

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