Vitis vinifera (wine grape): 100243944
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Entry
100243944 CDS
T01084
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X2
KO
K14312
nuclear pore complex protein Nup155
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100243944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100243944
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100243944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
100243944
NCBI-ProteinID:
XP_002281257
UniProt:
F6HFD8
LinkDB
All DBs
Position
1:complement(join(5398670..5398787,5401155..5401483,5407242..5407460,5408038..5408395,5409531..5409736,5409975..5410386,5410495..5410742,5411284..5411496,5411576..5413244,5413532..5413794,5414395..5414521,5414653..5414822,5427956..5428114))
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AA seq
1496 aa
AA seq
DB search
MSWDDEIVVRDVTNAGLVVSDRINRDVAAQTDLEEALEASRYTSHPYSTHPREWPPLVEV
MDTWELPPVLIERYNAAGGEGTALCGVFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCCGRGDGTDPYEEVSLQLLPE
YTIPSDGVTMTCITCTDKGRIFLAGRDGHIYEMHYTTGSGWNKRCRKVCLTVGLGSVISR
WIVPTVFKFGAVDPIVEMVVDNERHILYARTEEMKLQVFVLGPKGDGPLKKVAEERSLIN
QKDAHYGGRQSAGSRPSNRSVKPSIICISPLSTLESKWLHLVAVLSDGRRMYLSTAPSSG
NSGAVGGLSGFNTSHHKPNCLKVVTTRPSPPLGVTGGLAFGAISLSSRTQNEDLALKVES
AYYSAGALVLSDSSPPTMSSLLIVGRDSSTQSSVSGGLGTTARTSRALRESVSSLPVEGR
MLFVADVLPSPDIAATVQSLYSELEFSGFESSGESCEKACGKLWARGDLSTQHILPRRRI
VVFSTMGMMEVVFNRPVDILRRLLESNSPRSLLEDFFNRFGAGEAAAMCLMLAAKIVHTE
NLISNVVSEKAAEAFEDPRVVGMPQLEGSSAFSNTRTAAGGFSMGQVVQEAEPIFSGAHE
GLCLCSSRLLLPVWELPVMVMKGGLDTSNAMSESGIVSCRLSSGAMQVLENKIRALEKFL
RSRRNQRRGLYGCVAGLGDLTGSILYGTGSDLGAGDNSMVRNLFGAYSRSIEPGDGGTSN
KRQRLPYSPAELAAMEVRAMECIRQLLLRSAEALFLLQQLCQHHVTRLVQGFDVNLRQEL
VQLTFHQLVCSEEGDRLATRLISSLMEYYTGPDGRGTVDDISARLREGCPSYYKESDYKF
YLAVEFLERAAVTSDTEEKENLAREAFNFLSKVPESADLRTVCKRFEDLRFYEAVVRLPL
QKAQALDPAGDAFNEQLDAGTREHALAQLEQCYEIITSALRSLKGEASQKEFGSPVRPAA
RSTLDQASRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNA
GRESLQEVRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRLA
ERRSTDAGDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLLDLLEGKLAVLR
FQIKIKGELEAIASRLESSNVTSESVLNESCSESNLNADTNFANTVQEKAREISLDLKSI
TQLYNEYAVPFELWEICLEMLYFANYSGDADSSIVRETWARLIDQALSKGGIAEACSVLK
RVGSHIYPGDGAVLPLDTLCLHLEKAALERLASGVEPVGDEDVVRALLAACKGATEPVLN
TYEQLLSNGAILPSPNLRLRLLRSVLVVLREWAMSVFAQRMGTSATGASLILGGAFSLEQ
TTVINQGVRDKITSAANRYMTEVRRLALPQSQTEAVYRGFRELEESLISPFSFELY
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggacgacgagatcgtggtgcgcgacgtcaccaacgccggtctcgtcgtgagt
gaccgcattaatcgcgatgttgctgctcagactgacctcgaagaagccctggaagcttct
agatacactagtcatccgtattccactcatcctcgagagtggcctcctttggttgaagtg
atggatacttgggaattgcctcctgtgcttattgaaagatataatgcagctggtggggaa
gggactgctctatgtggagtgtttcctgagatacgcagggcatgggcttcagtcgacaac
tctttgtttctttggcgttttgataagtgggatggccagtgtcctgaatacagtggggag
gaacaagctatttgtgctgttggccttgccaaatctaaacctggagtttttgtggaagct
atccaatatcttttggtgttagcaactcctgttgagttgattcttgtaggtgtttgctgc
tgcggaaggggtgatggaacagatccatatgaggaggtttcactgcaacttctgccagaa
tatacaataccatccgatggggtcaccatgacttgcatcacttgtactgacaagggtcgc
attttcctggctggacgtgatggccacatttatgagatgcattacacaactggttcaggc
tggaataagcgttgtcgtaaagtttgcctcactgtgggattgggaagtgtcatttcaagg
tggattgtgccaactgtattcaagtttggagctgttgaccccattgttgaaatggttgtt
gataatgaaagacacattctttatgcacgaacagaagagatgaaacttcaagtttttgtt
ctgggcccaaaaggagatggtccccttaagaaggtggcagaagaaaggagtttgatcaat
cagaaggatgcacattatggtggcagacaatcagcaggatcaagaccctcaaatcgatca
gtaaagccttctataatttgcatttctcctttgtctacactggaatcaaaatggctacac
ctagttgctgttttatccgatggaagaaggatgtacctctccactgctccatctagtgga
aacagtggtgctgttggaggtttaagtggatttaatactagccatcataagccaaactgt
ttaaaagtagtaacaactaggccctctcctcctttgggagttactggtggacttgccttt
ggagccatatctctttctagtagaactcaaaatgaggatcttgcactgaaggttgagtca
gcatattattcagcaggagctcttgtcctttctgattcatcaccgccaaccatgtcttct
cttcttattgtgggcagggattcaagcacacaatcatcagtgtcaggtggtttagggaca
actgcaaggacttctcgggcattgagagaatctgtatcttccctacctgttgaaggccga
atgctttttgtggctgatgttctaccatcaccagatatagcagccacagtgcagtcactt
tattcagaattggaattctctggatttgaaagttcaggggaatcctgtgaaaaggcatgt
ggaaaactttgggctagaggagacctatcaacccaacatatattaccaaggaggagaatc
gtggtattcagtacaatggggatgatggaagtagtttttaaccggccagtggatattctt
agaaggttgttagaatctaactcaccaagatcattgttagaagatttttttaaccgtttt
ggagctggagaggcagctgctatgtgtttaatgctagctgcaaagatagtccacacggaa
aatctcataagcaatgttgtctctgagaaggcagctgaagcctttgaggatccaagagtt
gttggaatgccacaacttgaaggtagtagtgcattttcaaacactagaacggcagctggg
gggttcagtatgggacaggttgttcaagaagctgagcccatcttttctggtgcgcatgaa
ggactgtgcttgtgctcatcaaggttgcttcttcctgtgtgggaacttcctgttatggtc
atgaaaggtggtttagacacttccaatgctatgtctgaaagtgggatagtttcatgcaga
ctctccagtggggcaatgcaagtccttgaaaacaagattcgcgccttggagaagtttcta
aggtctaggaggaaccagagaagaggactctatggttgtgttgctggtctaggggacttg
actggatctattctctatggaaccggttcagacttgggtgctggtgacaatagtatggtt
agaaacttatttggtgcttactctcggagtattgaacctggagatggaggaacatcaaat
aaaaggcagcggcttccatatagtcctgcagaactggctgctatggaggtgagagccatg
gaatgtatcaggcagttgcttcttagatctgctgaagctctgtttttgctccaacaactt
tgtcagcatcatgtaacacgcttggttcagggttttgatgttaatctacgacaagaatta
gttcaattaacatttcaccaacttgtttgttctgaggagggtgatcggctggctacaagg
cttatatcttctctgatggagtattacactggtcctgatggcaggggaacagttgacgat
attagtgcaagattgcgagagggttgtccaagctattacaaggagtctgattacaaattt
tacttagctgtggagtttcttgagagagctgctgtgacttctgacactgaagagaaggaa
aatcttgctagagaggccttcaatttcttgagtaaagttccagagtctgcagatctgcga
actgtttgcaaaagatttgaggacttgagattttatgaagctgtggttcgcttaccactg
caaaaggcacaagctcttgaccctgcaggtgatgctttcaatgagcaacttgatgcagga
actcgggaacatgcacttgctcagcttgaacagtgctatgagattatcaccagtgctttg
cgttctctaaagggtgaggcttcccagaaggaatttggatctcctgtgaggcctgctgct
cgatccacccttgatcaggcttctcgagacaaatacatacgccaaattgttcagcttggt
gttcaatcatctgacagagtctttcatgagtacttgtaccgcactatgatcgatttgggc
cttgaaaatgagcttttagaatatggaggtcctgatctggtgccttttctgcagaatgct
ggtcgtgaatctttgcaagaggttcgggctgtttcttctataacatcaacaaggtctcca
gtgggtctatttggagcacctattccatccaatcaaaccaagtattttgatcttttggca
cggtattatgtcttgaagaggcaacatgtacttgcagctcatgtattactaagactggca
gagaggcgctcaacggatgcaggagatgtccctactttagagcagaggcgccagtacctg
agtaatgcagttctgcaggcaaagaatgcaagcaatagtgacggtctagtaggttctgtc
cggggtgcctctgacaatggactgctggatttgcttgaagggaagcttgctgttctccgg
tttcaaataaagatcaaaggggaactggaggctatagcttccagattagaatcttccaat
gttacatctgaatctgtcctgaatgaatcatgctctgagagcaacctgaatgctgatacc
aattttgcaaacactgtacaagaaaaggccagagagatatcactggatttgaagagtatt
actcaactatataatgaatatgctgttccatttgagctttgggagatatgcctggaaatg
ctgtattttgctaactattctggtgatgctgatagtagcattgtaagagaaacctgggct
agacttattgatcaagctctttcaaaaggcggcattgctgaagcttgttcagtcctgaag
agggttggttctcacatttatcctggagatggagctgttttacctttggacacattatgt
ctccaccttgagaaggctgcattggagcggttagcttctggggttgaacctgttggagat
gaagatgttgtgagagctcttctcgctgcttgcaagggtgcaactgaacctgtattaaac
acttatgaacaattgttatcaaatggagctattttgccatcgccaaacctgaggttgcgc
cttctccgttcagttcttgtggttcttcgtgaatgggcaatgtctgtatttgcacagaga
atgggcacaagtgctactggagcttctctaattttaggtggtgcattttctttggagcaa
acaactgtcattaaccaaggggttcgagataaaatcacaagtgctgcaaacaggtatatg
accgaggtgcggaggctagcccttccacagagccagaccgaggctgtctaccgtggcttc
cgagagctggaggagtccctaataagtcctttttcttttgagctgtactga
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integrated database retrieval system
