Vitis vinifera (wine grape): 100244043
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Entry
100244043 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100244043
KO
K15082
DNA repair protein RAD7
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100244043
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
100244043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
SAM_Ste50p
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100244043
NCBI-ProteinID:
XP_002278147
LinkDB
All DBs
Position
11:complement(join(939757..939873,940214..940369,940757..940832,941749..941910,942003..942436,943681..945453))
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AA seq
905 aa
AA seq
DB search
MTILRSREIVPVETLKKRFMDDSTSSKPNEPSTPNSSPSRNSHCSVQEPYMGAHMPDSGS
LSGSASNLRRSRRIASRLSRSEGSGEVAASGGRHKRKGGSGVNQVCSVEGRCESGSGNAK
GRVLGSDSVGEEDEVLEVKEGVEMAERGLGGSEITELGSKEEERKEPSVSLGSDLGSFVE
RTQRSEDMVTVKQSKGKRKLSFEASPLDDEDKGFLGLRSGKKIVKEIMCGVDRIESDGGK
YVVEQERGGEDKGVKVQGHGNGEAAVEELQKDPSANENGSVRGRRRFTGEEKGKGKLVED
DEPQNRIDAVELDLNLELKNVIDNMSADENDAVEGGQRYSREEKGKGILINDDLAPNAVN
PVDFNLESEVKNSVDTAVSESIQLEGNVGLQVQNEVIQTSVTGIASRARTRFRDIARRNA
SRFAHFAPEQEMENHPSREAEIQRPSEGGEKENEDWPGPFSTAMKIIKDREKKQNTQQNS
SSDRNRPAHVIWSPRKVKSSECPKPLAPSLQEMCLEVLAQNGDAITSLESIPDALRHKLS
QLLCDSRRMNSHILELLVSGSPFEVCVRDCSWLTEEEFARIFKRCDTNSLTVLQLDQCGR
CMTDYVLRATFDMLSNGLPALTTVSLKGACRLSDAGLRALVSSAPMLRSINLSQCSLLTS
ASIKNLAETLGSVLRELYIDDCQGIDAMLILSALEKLECLEVLSVAGIQTVCDDFIWEFI
SVHGPTMKELVLTDCSRLTDFSLKAIAETCPELRALDLGNLCKLTDSAFGYLASGCQAMQ
TLKLRCNSFSDEAIAAFLEISGGSLKELSLNNVSKIGHNTAISLARRSRELIRLDLSWCR
NLTDGDLGFIVDSCLSLRVLKLFGCTQITNMFVDGHSNPQVEIIGLKLTPILKHLKLTDP
QSFPL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttgaggtctcgagaaatagtcccagttgaaaccctaaagaaacgcttcatg
gatgattccacttcctccaagcccaatgagccctcaactcccaattcttcgccttctcgc
aattctcattgttctgtccaagagccatatatgggtgcccatatgcccgattccggttca
ctttcgggttctgcgtccaatctcaggcggagtcgtcgaatcgcttcgagattgagtcgc
agtgagggttccggcgaagtcgcggcgtccggagggcgccataaaaggaagggtggttcc
ggagtgaatcaggtgtgctcggttgaggggaggtgtgaatctggttcggggaatgcgaaa
ggtcgggttctgggttctgattctgttggggaggaggatgaggttttggaagtgaaggaa
ggagtcgagatggcagagaggggtttgggtggatcggaaattacagagttggggagtaaa
gaagaagaaaggaaagagccaagtgtaagtttgggttctgatttggggagttttgtggag
aggactcagaggagtgaagatatggtgactgtgaaacagtccaaaggaaagagaaaatta
agctttgaggccagtcccttggatgatgaggataaagggtttctgggtttgcggtctggg
aagaaaatcgtcaaggaaataatgtgtggagtcgatcgcattgagagtgatggtggtaag
tatgttgttgagcaagaacgtggaggagaagataaaggtgtaaaggttcagggtcatgga
aatggagaggctgctgtggaagaattacagaaagacccaagtgctaatgagaatggaagt
gttaggggaaggaggagattcactggagaagaaaaggggaagggcaaattggtggaggat
gatgagccacagaataggattgatgcagtggaattggatttgaacttggaattgaagaat
gttattgacaatatgagtgctgatgaaaatgatgctgttgagggtggacagagatacagc
agagaagaaaaagggaagggtatattgattaatgatgatttagcaccgaatgcagttaat
cctgtggattttaatttggaatctgaagttaagaattcggttgacactgcagtttcagag
tctattcagttggagggcaatgtaggattacaggttcagaatgaggttatacagactagc
gtgacagggattgcatcaagagcaaggacccggttccgagatatagccagacgaaatgca
tctcgatttgctcattttgcgcctgaacaggagatggagaaccatccctctcgtgaggct
gaaattcaaaggccatcagaaggaggggagaaggaaaatgaagattggcctggtcccttt
tcaactgctatgaagattattaaggacagagaaaagaagcagaacacacagcagaattcc
agttcagacagaaacagacctgcacatgtgatatggagtcctagaaaggttaagagcagt
gagtgcccaaaaccattggccccctcactgcaagaaatgtgccttgaagttcttgcccag
aatggtgatgcaatcacctctcttgaaagtatcccagatgcactgaggcacaaactaagt
cagttgctctgtgattctcggagaatgaacagtcatatccttgagctccttgtcagtgga
tcaccttttgaggtgtgtgtgagggattgttcatggctaacagaggaagagtttgcaaga
atctttaagcgttgtgacaccaacagcttgacagtgctacaacttgaccaatgtgggcgg
tgtatgacagattatgttttaagggctacctttgatatgttgtcaaatggccttcctgca
ttaacaactgtatccctaaaaggtgcatgccgtctttcagatgcagggctaagagcactt
gtttcttctgcccccatgttaagatctataaatctcagccagtgctctcttctaacttcc
gcttctattaaaaatttagctgagacattgggatctgttctgagagaattatatattgat
gattgccaaggcatagatgctatgcttattctatcggctctggagaaactagaatgtttg
gaagtgttgtcggtggcaggcattcaaactgtttgtgatgattttatctgggaattcatt
agtgtacatggccccactatgaaggagcttgttttaactgattgttcgagattgactgat
ttttctttgaaagctattgctgagacatgtcctgaattacgtgcacttgacttgggtaac
ttgtgcaagttgacggattctgcatttggttatcttgcaagtggttgtcaagcaatgcaa
acactaaaactccgctgcaattcattcagtgatgaagctattgctgcatttctagagatc
tcgggggggtctttaaaagagctttctctcaataatgttagcaagattggccacaataca
gccatatcacttgccagacgctcaagagagttgatacgtttggacctatcttggtgtcga
aatttgacagatggggacctgggatttattgtggatagctgcttatcattgagggtgctt
aaactttttggatgcactcagattacaaatatgtttgtggatggtcactcaaatcctcag
gtggaaatcatcggattgaagctgactccgatattgaaacatctcaagctgactgatcct
caatcatttccactgtag
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