Vitis vinifera (wine grape): 100244067
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Entry
100244067 CDS
T01084
Name
(RefSeq) RecQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100244067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100244067
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100244067
FA (Fanconi anemia) pathway
100244067
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF538
Motif
Other DBs
NCBI-GeneID:
100244067
NCBI-ProteinID:
XP_002280344
UniProt:
D7SH22
LinkDB
All DBs
Position
17:join(1190593..1191126,1191789..1191959,1192640..1192785,1192942..1193078,1194065..1194552,1195794..1195904,1195991..1196119,1196269..1196439)
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AA seq
628 aa
AA seq
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MQMLRRRLRLISSSDEEEEEEQQQAPAASHEAVTPVSANPNPNTSEPLPVDISDDDFVDV
SENFSTPSPPPAQTSGQSFQSSSFEPPSSGSISGESSNPIGDFLRGLGLCLRREWLDSCI
RGLESSVPGFASLDVAGKAKLCFEQFLCSDMNYSGAGVLPQNVDSMHLVDLAGPFVLQVD
EIVNISAPLRGRYQNAASGIKRCLKLSMTDGIQRVFGMEYRPIKDIEVLAPAGLKIAICN
VNIRHGLFMLVPEVFEILGGSVEELEAARQRLVHEVNKPPRGKRTKNGVVPPLATRATLA
AWPSSGVGVFGRTNSSTSQGATPFQAHDHGATSVAPGIGVNERSTEEFNVAVRRENAVPN
PSSNNVMVVEEVDMVTDSIASAAVSNDTGERMREEHTVPVCRDNAVPNLSSNAVSDAAEV
HMVAVPITGENDVPNSSHNAVSDVEEIPMVDEADHPLILTGEREIPFTYLASLSAKWAGR
KEKAPFVQGKIKCFLTGVKGFQYKQRTTFDLRVYVDDGSLISEILIDHNVVQQGIGYSPK
EVTAALASSDVKIVSGMKDTLKQFQIFLANFEGTMVVEINETSPLPIALEMVQGCPASDA
WLLLRRLKSFTSIQAPRNSPLEPIDLSP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgctcagaaggcgtctgaggttaatctcttcttcagatgaagaagaagaagaa
gaacagcagcaagcacctgctgcgagtcacgaagctgttactccagtctctgctaaccct
aaccctaacacctctgagcctctcccagttgacatctccgatgatgatttcgtcgacgtc
tccgaaaatttctcgacaccgtctcccccacctgctcaaacttccggccagtccttccag
tcatcgtccttcgaaccgcctagttccggctctatctccggcgaaagctccaatccgatc
ggcgactttcttcgggggcttgggctgtgtttgcggagagaatggttggattcttgcatt
cgcggtctcgaaagctctgttcctggctttgcgagtttggatgtggctggaaaagcgaag
ctctgtttcgagcagtttctgtgttctgacatgaattactctggtgccggtgttcttccc
caaaatgttgattcgatgcatcttgttgatctcgcagggccatttgtgttgcaggtagat
gagatagttaatatcagtgctcctcttcgaggcaggtatcaaaatgcagcttctggtatt
aaaaggtgcctcaaattgtccatgaccgatggtattcagcgtgtgtttggcatggagtac
aggcctatcaaagatattgaagttttggctcctgctggattgaagattgccatctgtaat
gtaaatatacgacatggacttttcatgttggtgcctgaggtttttgagattctaggagga
tcggttgaggagttggaagcagcacgacaaaggctggttcatgaagtaaataaaccacct
agagggaaaagaacaaagaatggtgtcgttcctcctttagcaactagagctactcttgca
gcatggccatcaagtggtgttggtgtttttgggcgcacaaatagttccacatcccaaggt
gctactccatttcaggcgcatgatcatggtgctacttcagttgctcctggcattggtgtc
aatgaaaggtctacagaagagttcaatgttgctgttaggagggaaaatgctgtgcctaat
ccatcatctaacaatgttatggttgttgaagaggtcgatatggttactgattccattgct
tcagcggcagtcagcaatgatactggtgaaaggatgagggaagagcataccgttcctgtt
tgcagggacaatgctgtgcctaacctgtcctctaatgctgtttcagatgctgctgaggtc
catatggttgctgttcccataactggggaaaatgatgtacctaactcatcccataatgct
gtttctgatgtggaggagatccctatggttgatgaggctgaccacccactgatactaact
ggagagagagagatccctttcacttacttagctagtttgtcggccaagtgggctggaagg
aaggagaaagcaccttttgttcagggaaaaattaagtgcttcttgactggtgtaaaggga
ttccaatataagcaaaggactacatttgatcttcgggtttatgttgatgatggtagcctc
atctctgagatccttattgatcacaatgttgtacagcaaggaataggttattctcctaag
gaggtcactgctgctcttgcttcttcagacgtgaaaatagttagtggcatgaaggacacc
ctgaaacagttccaaattttcttagcgaattttgagggtacaatggttgtagagataaat
gaaacctcccctcttccaattgcccttgagatggtgcagggctgtccagcatctgatgca
tggttgcttctgagaagactgaagtccttcacttctattcaagcaccacggaattccccc
ttggagcccattgatctatccccttga
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