KEGG   Vitis vinifera (wine grape): 100244093
Entry
100244093         CDS       T01084                                 
Name
(RefSeq) polyubiquitin 9
  KO
K03873  elongin-B
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100244093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100244093
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100244093
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     100244093
   Cul5 complex
     100244093
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100244093
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_2 Rad60-SLD_2
Other DBs
NCBI-GeneID: 100244093
NCBI-ProteinID: XP_019082200
UniProt: A0ABY9DLS5
LinkDB
Position
17:complement(join(2323036..2323118,2327570..2327609,2327819..2328004,2333936..2333938))
AA seq 103 aa
MAMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLA
DQKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDGSW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtatatacgtgttaaacgcagtaagacaacctactttctacagtgtgatcca
actgagacaattctagatgttaagcagaaattgcataccctcattgatcaaccaatcaat
gatcagcgtttgatcttagtaggaactggggaaatattagatgattccaaaacgttggca
gatcagaaggtcgaaaatgatgctgttgtggcactgacattgagaaaagatgacaatgaa
tttgaggatgtcaacatcgtgcggccaaatgatgatttctatcagtctcgtgatccagat
ggcagttggtaa

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