KEGG   Vitis vinifera (wine grape): 100244192
Entry
100244192         CDS       T01084                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100244192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100244192
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100244192
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    100244192
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     100244192
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 100244192
NCBI-ProteinID: XP_010646338
UniProt: D7TG17 A0ABY9DPD5
LinkDB
Position
17:complement(join(13846265..13846397,13846560..13846756,13852388..13853857))
AA seq 599 aa
MEEKERHSDLFLEFAFRNDGLKKKKGNDSQSGGAVFLSSIHPVKKANARSNLPMIDLQSQ
NSRGISPYFQKKKTLECNSNRIISPYFQKAVKEGEDRDSEAPLESESRGISPYFQKKRRM
VFDSIACSGSDSNSQRLISPYFQKAVKQEERYSEEHCNFPNETDNKKKKKKKRKRKGNDT
FESLKEERKINVQNVKMDDQKMGVELPVFNSNSSSERKVSPFCQKAVKEEEEMNLEAQVD
SKPTVVSPYFEKKKRAVSDSVANSSSDSNSQRLVSPYFQKAVKQQERNPEEHCNFPNKIE
RRKTKKRKKKGNDTVESFKEQKKKINVQNVRVEDQKMEVQQPISSSNSNSQKKVSPYCQR
AVKEEEEGNSEEDTKKGHENEESFKEEGKRKTNAQNVTMEDEKMKLPKKKSRAPPIRVVS
PYFPINEEDAKKPVRAMFFNKLNVAYRRKSPDNNWKPPPSHFHLLQEDHYHDPWRVMVIC
MLLNCTSGLQASRVISDLFTLCPDAKTATDVPTEMIEKVIETLGLQKKRAAMIQRFSREY
LDDSWTHVTQLHGIGKYAADAYAIFCSGDWGLVVPNDHMLVKYWKYLYKVITPYGSQKQ
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggaagaaaaagaacggcattcggatttattcttggaattcgctttcaggaatgatggg
ttgaagaagaagaaagggaatgattctcagagcggtggtgctgtgtttttgtcgtccatc
catcctgtaaagaaagcaaacgcacggtccaatctccctatgattgatttgcagagtcag
aattccaggggaatttcgccttatttccagaaaaagaaaaccctagaatgcaattccaat
aggattatctctccctattttcagaaggcagtcaaggaaggagaggacagggattcagag
gcgccgttggagagcgaatcaagggggatttccccttattttcagaagaagagaaggatg
gtattcgattccattgcctgctccggttcagattccaattctcaacggttaatctctcca
tatttccagaaggcggtgaagcaagaagaaaggtattcagaggagcactgcaatttccct
aatgagactgataacaagaagaagaagaagaagaaaaggaagaggaaagggaatgataca
tttgaaagcttaaaagaagaaaggaaaataaacgttcaaaatgttaaaatggatgatcaa
aagatgggagttgagctgcccgttttcaattccaattctagttccgaaaggaaagtctct
cccttttgtcaaaaggcagtaaaggaagaagaggagatgaatttagaggcccaggtggac
agcaaaccaactgtggtttccccttattttgagaagaagaaaagggcggtatcagattcc
gttgccaactccagttcagattccaactcccaacggttagtctctccctatttccaaaag
gcagtgaagcaacaagaaagaaatccagaggagcactgcaattttcctaataagattgag
aggaggaagacaaagaaaaggaagaaaaagggaaatgataccgttgaaagctttaaagaa
caaaaaaagaaaataaacgttcaaaatgtcagggtggaggatcagaagatggaagtacag
caacccatttccagctccaattccaattcccaaaagaaagtctctccctattgtcaaagg
gcagtaaaggaagaggaggaggggaattcagaggaagatacaaagaaagggcatgagaat
gaagaaagcttcaaagaagaaggaaagaggaaaacaaatgctcagaatgttactatggaa
gatgagaaaatgaaattgccaaaaaagaagagtcgggcaccaccgattagagtagtatcc
ccatacttccccataaatgaagaagatgctaagaaaccggttcgagctatgttttttaat
aagctaaatgtggcttacagaagaaaaagtcctgataataattggaagcctccaccctcc
catttccatctccttcaagaagatcattaccatgatccttggagggtcatggtcatatgc
atgctccttaactgcacttctggtctccaggcaagtagagtaatttccgatctcttcact
ctctgtcctgatgcaaagactgctacagatgttcccaccgagatgatagaaaaggtcata
gagactctaggtttacaaaagaagagggcagcaatgatacaacgtttctctcgggaatat
ttggacgatagctggacacacgtgacccaattgcatggtattggcaaatacgcagcagat
gcatatgcaatattctgttcaggagattggggcctggtggtacccaacgaccacatgctg
gtgaaatactggaaatacctttataaagttattactccctatggatctcagaaacaatga

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