KEGG   Vitis vinifera (wine grape): 100244212
Entry
100244212         CDS       T01084                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100244212
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100244212
SSDB
Motif
Pfam: LSM14 FDF SM-ATX Terminase_5
Other DBs
NCBI-GeneID: 100244212
NCBI-ProteinID: XP_002269544
LinkDB
Position
2:complement(join(20204413..20204556,20204631..20204741,20204891..20205088,20206774..20207724,20207804..20207875,20220772..20220872,20223671..20223800))
AA seq 568 aa
MATEPSADSYVGSFITLISKCEIRYEGVLYFLNAQDSTIGLKNVRSYGTEGRKKDGTQIP
PSDKVYEFILFRGSDIKDLQVKSTPPAQKEDQIHDDPAIIQSHCSGGLSSSLASASVGGG
ALTESSGYQDAPALVHRAYPGALPSYQSGMPVGPLGQPQTTQIAGVPSHAMSMYWQGYNE
TSISTSHAPQQPSPQATSTTSFPSALPNELQAPEIQASPSVSLTNTLECIAPAPSLIASD
SAPSLIPSNSVPSLIPLNSALSKFSSSLTQEQFSTSSDTMSFLSAKATLPSYSAPVNSNI
INMSSFPSSYQDVNTTEAPITGKIVSDLVSVPPIHPLHHSASTIGGSTSGLLLTPPPTLL
TPDQLAQPMSSMLSSSQKVYPDQRDKVAPTSTSPNTLSTMSTPALQAPLLPLPASAQQSQ
KSAVQFTEEFDFIAMNERFKKDEVWGYLGKAKQRDEKEGMEDNALGQGLGDREGYGQVPK
SDAKPAYNKDEFFDTISCNSHARGTRNGQNRFSARMKMDTETFGNFQQRPHLGYGGYRAG
RGENYRGSYNRGRGFAYGGRGGGWDMPM
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctactgaaccttccgccgattcctacgtaggcagcttcatcactttgatatccaag
tgcgagattcgctacgagggcgtcctctatttcctcaacgcccaagactccaccatcggc
ttgaaaaacgtaaggtcttatgggacagagggacgaaagaaagatggcacacaaattcct
ccaagtgataaagtgtatgaattcattcttttccggggaagtgacattaaggatttgcaa
gttaagtcaacaccacctgctcaaaaagaagatcagattcatgatgatcctgctatcatt
cagtcacattgctctggcgggctttcaagttctctggcatcagcttcagttggtggtgga
gctttgacagaatcaagtggttaccaggatgcccctgctttggtccatagagcctatcct
ggtgcattaccttcatatcaatctggcatgccggtgggtccattgggccaaccgcaaacc
actcaaattgctggtgtgccatctcacgccatgtcaatgtattggcaaggatataatgaa
acatcaatcagtacctctcatgctccacagcagccttctcctcaggcaacatccacaacg
tcatttccctcagcattgccgaatgagttgcaggctcctgaaattcaggcatctccatct
gtgagcttgacaaatacattggaatgcattgctcctgcaccttcacttatagcatctgat
tctgcaccctcacttataccatctaattctgtgccttcacttatcccgttgaattctgcg
ctttcaaaattttcatcttctcttactcaggaacagttttctacttcttctgatacaatg
tccttcttgtctgcgaaggcaactctgccatcctactctgcacctgtaaattcgaatata
ataaacatgtcttcatttccttcatcttatcaagacgttaacaccactgaagctccaatt
actggtaaaatagtttctgatctggtatcggtgcctcctatccatcccctgcatcattct
gcatccacaatagggggttccacctctggcctccttctgactccaccaccaactttatta
actcctgatcaattagcacagcccatgtcatccatgctttcttcctcacagaaagtatac
cctgatcagagggataaggttgctccaacatcaacatctcctaatactttgagcacaatg
tctactccagcacttcaagcaccattgttgccattgccagcctctgctcaacagtctcag
aagtctgctgtgcagttcactgaagaattcgattttatagcgatgaatgaaaggtttaaa
aaggatgaagtttggggttatcttggaaaggcaaagcaaagggatgaaaaggaagggatg
gaggacaatgcacttggtcaaggcttgggtgacagagagggttatggacaagtacccaaa
tcggatgctaaacctgcttataataaggatgagttctttgacacaatttcttgtaattct
catgcccgcgggactaggaatggacagaacaggttctctgcgcgaatgaagatggatact
gagacttttggcaattttcagcagagacctcatctaggttatggtggctacagagctggg
cgtggtgagaactaccgtggctcatataaccggggaagaggatttgcctatggtgggaga
gggggtggttgggacatgcccatgtga

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