Vitis vinifera (wine grape): 100244222
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Entry
100244222 CDS
T01084
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
eIF-1a
Motif
Other DBs
NCBI-GeneID:
100244222
NCBI-ProteinID:
XP_059590199
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Position
17:join(23322..23489,24081..24155,24251..24364,24457..24561,28200..28406,29114..29329,29415..29522,30502..30672,30768..30965,31052..31411,31510..31740,31820..32008,32082..32159,32250..32444,33647..34024,34867..35076)
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AA seq
1000 aa
AA seq
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MASSSSSTVAGATGWLRGKVKAVPSGDCLVIMGNSKGDSPPPERTITLSSLIAPRLARRG
GVDEPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVFLGDKNVSVLVVSEGWARV
RETGQQKGEVSPVLAELLRLEEQAKQQCLGRWSKTPGASELSIRNLPPSAIGDPSNLDAM
GLLNANKGRAMQGIVEQVRDGSTIRVYLLPEFQFVQVFVAGIQAPSMGRRAAAEAIVETE
LASDEPNGEGSAETRPALTSAQRLAASTASSNEVAPEPFGKEAKHFTEIRVLHREVRIVL
EGVDKFGNLIGSVYYPDGESAKDLALELVESGLAKYLEWSASMMEEDAKRRLKSAELQAK
KNRLRFWTNYVPPPTNSKAIHDQNFTGKVVEVVSGDCIIVADDSLPFGSPLAERRVNLSS
IRCPKMGNPRRDERPAPYAREAREFLRTRLIGQQVNVSMEYSRKVGLADGPTTASADSRV
MDFGSVFLVSPTKVEADGASTPAISTAGSQHAGVNVAELVVARGFGTVIRHRDFEERSNY
YDALLAAESRAISGRKGIHSAKDPPVMHITDLLMASAKKAKDFLPFLQRVRRMPAIVEYV
LSGHRFKLLIPKETCSIAFSFSGVRCPGRDEPFSDEAIALMRRKIMQRDVEIEVETVDRT
GTFLGSLWEAKTNMAVTLLEAGLAKLQTSFGSDRIPDAHLLAQAEQSAKKQKLKIWENYV
EGEEVSNGSATESKQKEVLKVVVTEILGGGRFYVQTIGDQRVASIQQQLASLNLQEAPVI
GAFNPKKGDIVLAQFSADNSWNRAMIVNAPRGAVESPKDKFEVFYIDYGNQEIIPYSQLR
PLDPSVSSAPGLAQLCSLAYIKVPSLDEDFGQEAAEHFSDMTLNSSKELRAVIEDKDTSG
GKVKGQGTGIVLIVTLIDVEAESSINAAMLKEGLATVEKRKRWDPKEKQIAFDNLEKFQA
EARLNRLRMWQYGDIQSDDEDTAPPVRKAGGRRLIKASTS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcatcatcgtcgactgtagctggcgccacaggatggttgagaggaaaggtg
aaagctgttccttcgggagactgcttagtgataatgggaaactccaagggcgatagccct
ccgccagagaggacaataactttatcatctctgattgctcccagattggcccgtaggggt
ggagttgatgagccgtttgcatgggacagcagagagtatttaaggaagctctgcattgga
aaggaagtcactttcagagttgattatactgtaccatccattggaagagaatttggctcc
gttttccttggcgacaaaaatgtttcggtgctggttgtttctgaaggctgggcaagggta
agggagacaggtcaacagaaaggagaagtaagtcctgtccttgcagaattgcttcgcctt
gaagagcaagctaagcaacaatgtctaggtcgttggagcaagacacctggtgcttctgag
ctatccatcaggaacttacctccctcagccattggtgatcctagtaacttggatgccatg
ggcctactcaatgcaaacaagggtagggccatgcaaggtattgttgagcaggttcgagat
ggcagtaccatccgggtctatttgcttcctgaattccagtttgttcaagtgtttgttgca
ggaatccaggctccatcaatgggaagaagagctgcagcagaagccattgttgagacagaa
ctggcatctgatgagccaaatggagaaggatctgctgaaactcggcctgctttaacatca
gcacagaggttggcagcatcaacagcatcctctaatgaagttgcccctgaaccatttggg
aaggaagctaaacacttcactgagattcgtgttttgcatagggaggtccgtatcgtatta
gaaggtgttgacaaatttggcaatttgatcggttcagtatattatcccgatggtgaatca
gcaaaggacctagcactggagcttgtagaaagtggtttagctaaatatctagaatggagt
gctagtatgatggaagaagatgccaaacggcggctgaagtctgcagaacttcaagcgaag
aagaatcgattgagattctggacaaactatgttcccccacccacaaattcgaaggcaatt
cacgaccagaattttactggaaaagtggttgaggttgtaagtggggattgcatcattgta
gctgatgattctctcccattcggcagcccattagcagaacgacgagttaacctctccagt
atcaggtgtccaaaaatgggcaatcctcgtagagatgaaagacctgctccctacgcccgt
gaagcaagggagtttctacggacacggcttattggccaacaagtgaatgtttcaatggaa
tattctaggaaggtaggcttggcagatggacccacaactgcttctgcagattctagggta
atggattttggatcagtcttcctggtctctcctactaaggttgaggctgatggtgcatcc
acacctgctatatctactgctggaagtcagcatgctggggtaaatgttgctgagctagtt
gttgcccgtggctttggcactgtcatcaggcatcgagattttgaggaaagatcaaactat
tatgatgctctccttgctgctgaatcgcgtgctatttctgggagaaaaggaatccattct
gcaaaggatcctccagtgatgcatataacagacttgcttatggcatcagcaaagaaagca
aaagatttcttgccatttctgcaaagggttaggaggatgcctgccattgtggaatatgtc
ctcagtggtcaccgctttaaactgttgattcctaaggaaacatgtagcattgctttctcg
ttctctggtgttcgatgtcctggtcgtgatgagcctttttcagacgaagcaattgcacta
atgagacgaaagataatgcaaagagatgtcgaaattgaagtggaaactgttgatagaact
ggaactttcttgggatctctatgggaggcaaaaaccaacatggcagtgacacttcttgag
gctggactagcaaagcttcaaacttcctttggcagtgacaggatccccgatgctcacctt
cttgctcaggctgagcagtctgcgaaaaagcaaaaactaaaaatatgggaaaactatgta
gaaggagaagaagtttctaatgggtcagctactgaaagcaaacagaaagaagtgcttaag
gtagtggttactgaaattttaggtggtggtagattttatgtccagacaatcggagatcag
agagtagcctctattcagcagcagcttgcttctctgaatcttcaagaagctcctgtcatt
ggtgcttttaatcctaagaagggtgacattgtccttgcgcaatttagtgcagataattcg
tggaaccgagcaatgattgttaatgcacctcggggggctgttgaatccccaaaagacaaa
tttgaagtgttctacattgactatggaaatcaagaaattattccttacagtcagttgagg
ccacttgatccttcagtgtcctctgctcctggccttgctcagctatgcagccttgcatac
ataaaggttccgagcttggatgaggattttggtcaagaagcagctgagcattttagtgat
atgacattaaatagttcaaaagagctcagggctgtgattgaggataaggatacttcagga
ggaaaagtgaaaggacaaggaactgggatagtccttattgtaactttgattgatgtggaa
gctgaatccagtataaatgctgcaatgttgaaggaagggcttgctactgtagagaaaaga
aagagatgggaccccaaggaaaaacagatagcatttgataatttggaaaaattccaggca
gaagcacgacttaacaggctaaggatgtggcagtatggggatattcagtcagatgatgag
gacacagctccacctgttagaaaggctggtggtcggcgattaataaaagcttcaacatcc
tga
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