KEGG   Vitis vinifera (wine grape): 100244281
Entry
100244281         CDS       T01084                                 
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X4
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100244281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100244281
   03036 Chromosome and associated proteins [BR:vvi03036]
    100244281
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     100244281
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    100244281
   RSF complex
    100244281
   WICH complex
    100244281
   B-WICH complex
    100244281
   NORC complex
    100244281
   BRF complex
    100244281
   NuRF complex (fruit fly)
    100244281
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII HDA2-3 Myb_DNA-binding HAND DEAD DBINO CHDII_SANT-like AAA_14
Other DBs
NCBI-GeneID: 100244281
NCBI-ProteinID: XP_002275787
UniProt: D7T6I2
LinkDB
Position
5:complement(join(3706853..3706870,3706964..3707065,3707191..3707406,3707512..3707690,3708243..3708408,3708484..3708542,3708631..3708685,3708792..3708861,3708945..3709034,3709129..3709205,3709330..3709361,3709465..3709653,3709753..3709846,3709933..3710020,3710117..3710337,3710493..3710566,3710663..3710945,3711029..3711163,3711861..3712082,3712169..3712348,3712560..3712657,3713333..3713445,3714154..3714260,3714375..3714506,3715405..3715647))
AA seq 1080 aa
MAKPSKSQVSSDEALSNGSNSSEEEQLNDQINDEEDEEELEAVTRTAVSEDEDEEAADGG
NSPATEDDAAGDSSDGEEDEEDGNAVGGTEISKREKARLKEMQKMKKQKIQEILDAQNAA
IDADMNNRGKGRLKYLLQQTEIFAHFAKGDQSTSQKKTKGRGRHASKVTEEEEDEECLKE
EEDGLSGTGNTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTI
SLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRHIRDNLLV
AGKFDVCVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLIT
GTPLQNNLHELWSLLNFLLPEIFNSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRL
KSDVEKGLPPKKETILKVGMSQLQKQFYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCN
HPYLFQGAEPGPPYTTGEHLITNSGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDY
LMFRGYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYD
SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA
EQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAI
KFKMDDTAELYDFDDEKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGAPA
KQREPRIPRMPQLHDFQFFNTQRLNELYEKEVRYLMQTHQKNQLKDSIDVDEPEDLGDPL
TAEEQEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDVKSIASEMEGKTEEEVERYAKA
FKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKL
YNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVE
RENQEFDERERQARKEKKLAKNMTPSKRAMARQATESPTSVKKRKQLLMDDYVSSGKRRK
NT seq 3243 nt   +upstreamnt  +downstreamnt
atggcgaaaccctcgaaatcgcaggtttcatccgatgaggccttatcgaatggctcaaac
tcctccgaggaagagcaactgaacgatcagatcaacgacgaagaggacgaggaggagctt
gaagcggtcacgaggactgccgtctctgaggacgaggatgaagaagccgctgacgggggc
aactcgcctgccacagaagacgatgctgccggcgatagcagcgacggcgaggaagacgag
gaggatggaaatgctgtgggtggcactgaaattagcaagcgtgaaaaggccaggcttaaa
gaaatgcagaagatgaagaaacagaagatccaggaaatattggatgctcaaaatgctgct
attgatgccgatatgaacaatagagggaagggacgcttgaagtatctcttgcagcagaca
gagatttttgctcattttgccaagggtgatcaatccacatctcagaaaaagacaaaggga
aggggtcgccatgcatcaaaagtgactgaagaggaagaagatgaagagtgcctgaaagag
gaagaagatggtttatctgggacaggaaacacgcggctggtgacacagccctcatgtatt
cagggaaagatgagagattaccaacttgctggcctaaactggctcatacggctgtatgag
aatggcatcaatggaatcctcgcagatgaaatgggtctgggtaaaacattgcaaaccatt
tctttattgggttatctgcatgagtttagaggaataactggtccccacatggttgttgcc
ccaaaatcgactcttggcaactggatgaatgaaattcgacgtttttgtccagttctgcgt
gctgtgaagtttcttggaaatcctgatgaaaggaggcatatacgtgacaatttactggtt
gctgggaaatttgatgtctgtgtcactagtttcgagatggccatcaaagagaaaactaca
ttgcgacgctttagttggcgctatatcatcattgatgaagctcatcgaatcaagaatgag
aattctcttctttcaaagacaatgagactatatagtacgaactaccgccttcttatcacg
ggtacaccacttcagaacaatcttcatgaactatggtctcttctcaactttctactgccc
gagatatttaattcagctgagacttttgatgaatggttccaaatttctggagataatgac
cagcaggaggttgttcaacagcttcataaggtcctccggcctttcctccttcggagactg
aagtcagatgttgagaaaggcttgcctccaaaaaaggaaacaatacttaaagtaggcatg
tctcaattgcagaaacagttctacagggctttactacaaaaagaccttgaagttgttaat
gctggtggagaacgcaaacgtcttttgaatattgcaatgcaactgcgtaaatgctgcaat
cacccatatcttttccaaggtgctgaacctggacctccttatacgacaggagagcacctt
attacgaattctggtaagatggttcttttggataagctacttccaaagctaaaagagcgt
gattctagggttctaatattttcacagatgacaaggttgctggacattcttgaagattac
ttgatgtttcgaggatacctgtattgtcgaattgatggaaatacagggggagaagatcgt
gatgcctccattgatgcatttaataaacccggaagtgagaaatttgtgttcttactgtca
actagagctggaggtcttggtatcaatcttgctactgcagatgttgtcatcctttatgac
agtgactggaacccccaagttgatttgcaagcacaagatcgtgctcatcggattggtcaa
aagaaagaagttcaagtgtttcgattctgcacagagtataccatcgaggaaaaggtgatt
gagagagcttataaaaaattggcactcgatgctttggtgattcaacaaggacggttagca
gagcagaaaactgtgaacaaagatgagctactgcaaatggtcaggtttggtgctgaaatg
gttttcagctccaaggatagcacaattacggatgaagacatagacaggatcattgctaaa
ggagaagaggcaacagctgagcttgatgctaagatgaagaaatttacagaagatgccatc
aaatttaaaatggatgatactgctgagttgtatgattttgatgatgaaaaggatgagaac
aagtttgacttcaagaaaattgtcagtgaaaactggattgagccaccaaaaagagagcgg
aagcggaattactcagagtctgaatactttaagcaaacaatgcggcaaggtgctccagca
aaacaaagagagcctagaataccgcgcatgccccagctgcatgatttccaattctttaac
acacaaaggctgaatgagttgtatgagaaagaagtgcggtacctcatgcaaacacatcaa
aagaatcagttaaaagactccatagatgtggatgaacctgaagacttgggagatcccttg
actgccgaggagcaggaagaaaaggagagattattagaagagggattttcatcatggagt
agaagagatttcaatactttcattagggcttgtgagaagtatggccggaatgatgtaaaa
agtattgcttctgaaatggaagggaagacagaggaggaagttgagagatatgcaaaagcc
ttcaaagaaagatacaaagaattaaatgattatgataggatcatcaagaacattgaaaga
ggagaggctagaatttctaggaaagatgagatcatgaaagcaattgggaagaagttggat
cgctacaagaatccatggctggaactaaagatccagtatgggcaaaacaaagggaagttg
tacaatgaagaatgcgatcgttttatgatatgcatggttcacaaacttggatatgggaac
tgggatgagctgaaggcagcatttcgcacttctcccttgtttcgttttgattggtttgta
aagtctcgcacaacccaagagcttgcaagaagatgtgataccctcattcgattagtggag
agggaaaatcaagaatttgatgagagggagagacaggcacggaaagagaagaagcttgcc
aagaatatgacaccatcaaagcgtgccatggcaaggcaggcaactgagagcccgacctct
gtaaagaaacggaaacaactgttgatggatgactacgtgagctcgggcaagaggaggaaa
tga

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