Vitis vinifera (wine grape): 100244343
Help
Entry
100244343 CDS
T01084
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100244343
04131 Membrane trafficking [BR:
vvi04131
]
100244343
04121 Ubiquitin system [BR:
vvi04121
]
100244343
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100244343
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100244343
Membrane trafficking [BR:
vvi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100244343
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100244343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100244343
NCBI-ProteinID:
XP_002273666
UniProt:
F6HKX7
LinkDB
All DBs
Position
8:join(16950876..16951130,16952292..16952350,16953441..16954620)
Genome browser
AA seq
497 aa
AA seq
DB search
MLQIRLSRDPSLGSGSGSKPLPVETVTVACPDHLVLADLPVAKSLGSMTAASLVKTVGRR
SRRQLGERVHFCVRCDFPIAIYGRLIPCEHAFCLDCARSDSICYLCDERIQKIQTIKMME
GIFICAAPHCLKSFLKRAEFESHIHESHADLLQPNAEKEDGNESEALSVKQSTVSDSTAR
APSRPVFSPSSSSQLHDREDKARRQQPREQQPPSRPIIQPKPPPFFHPSELQPDNNRPPQ
GFDRPGLHRFHPQTFDNQGGLQQESAQFSDKQQGILSESPYAEYPPLHSHQPPNFAVPLN
PNPLLTPPPFNYHHFPSEGAQTFYSSPHEMARPDSAPDVGTEQGSLLGFPPGPVGGVNFP
ESYPRPWNSGPVGVPFEGPTGGQPIPDGLGNASDPQGRGAFFQGDYGRNPGSLPSNPPLP
PLANKGMEPTQGSAAMDPRDGKGILAQPPLPLPPPPPPPPHLSQLKRAKFFSGDTSRDGQ
GFGWQQEKHDSFGSGQD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatccggcttagcagggacccatccctgggaagtggcagtgggtcaaagcct
ttgccggtggaaactgtgacagttgcatgtcctgaccaccttgtccttgcagacctccct
gtggcaaagagcctcggttcaatgactgctgcttcccttgttaagactgtaggtcggaga
tcccgtcgccagctcggtgaacgagttcatttctgtgttcgatgtgatttccccattgca
atctatggacgcctgattccatgtgagcatgccttttgtctcgattgtgctaggagtgat
tctatctgctacctttgtgatgaacgcattcagaagattcagactattaaaatgatggaa
gggatcttcatctgtgcagcccctcactgtctaaagtccttcctaaagagggctgaattt
gagtcacatattcatgagagccatgcagaccttcttcaaccaaacgcagagaaagaagat
ggaaacgagtcagaagctctgagtgtcaaacaatctactgtttccgactccacagcaaga
gctccatcgcggccagttttctctcctagctcaagttcccagcttcatgatcgggaagac
aaggctcgtcgccaacagcctagagaacaacaaccaccttccaggccaatcatacagcca
aagccaccacctttctttcatccatcggagctccaaccagataacaaccgacctccccaa
ggttttgacaggcctggtttgcaccgcttccatccacagacatttgacaatcagggtggt
ctgcagcaagaatctgcccagttttcagacaagcagcaaggaattttatctgagtctcca
tatgctgaataccctcctctgcattcccatcaaccacccaattttgcagtgccacttaat
ccaaatccactgctaactccccctccgttcaattatcatcattttccatctgagggagct
caaacattttacagctctccacatgagatggcacggcctgattcagcaccagatgttgga
acagaacaagggtcattgttgggtttcccacctggtccggtaggtggtgtgaatttccca
gaaagttatcctcgtccctggaacagcggacctgtgggtgtgccttttgaaggtccaaca
gggggtcaaccaattccagatggtttgggaaatgcatcagatcctcaagggagaggtgca
ttttttcaaggtgattatggacggaatcctggaagtttgccttcaaaccctcctcttcca
cctttggccaacaaggggatggaaccaacacagggtagtgctgcaatggatcccagggat
ggcaagggtatactggcacaaccacccttgccactcccacccccacccccaccaccccct
cacttgtcacagctcaaaagagctaagttcttttctggtgatacaagccgagatggacag
ggatttggatggcagcaggagaagcatgatagttttggaagtgggcaggactag
DBGET
integrated database retrieval system
