KEGG   Vitis vinifera (wine grape): 100244356
Entry
100244356         CDS       T01084                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100244356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100244356
   03110 Chaperones and folding catalysts [BR:vvi03110]
    100244356
   03029 Mitochondrial biogenesis [BR:vvi03029]
    100244356
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100244356
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     100244356
Messenger RNA biogenesis [BR:vvi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     100244356
Chaperones and folding catalysts [BR:vvi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   100244356
Mitochondrial biogenesis [BR:vvi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    100244356
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100244356
  Exosomal proteins of other body fluids (saliva and urine)
   100244356
  Exosomal proteins of breast cancer cells
   100244356
  Exosomal proteins of colorectal cancer cells
   100244356
  Exosomal proteins of bladder cancer cells
   100244356
SSDB
Motif
Pfam: Cpn60_TCP1 ChlI
Other DBs
NCBI-GeneID: 100244356
NCBI-ProteinID: XP_002285608
UniProt: D7TS57 A0ABY9BYH3
LinkDB
Position
5:join(11462629..11462666,11462771..11462795,11462883..11463014,11463819..11463978,11464223..11464398,11464529..11464624,11465308..11465412,11465576..11465662,11465748..11465837,11465954..11466034,11466121..11466189,11466399..11466476,11466660..11466755,11466901..11467000,11467081..11467184,11467549..11467654,11467778..11467856,11467952..11468057)
AA seq 575 aa
MYRFATSLASKARIARNSTHQIGSRLNWSRNYAAKDIRFGVEARALMLKGVEELADAVRV
TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSRAKMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
TQKCELENPLVLIHEKKISNIHAVVKVLEMALKTQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKAALQDLATLTGGELITEELGLNLEKAELDMLGTCKKVTISKDD
TVILDGAGDKKAIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTSNFDQKIGVQIIQNALKT
PVFTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVELPKDEKEVPAMGGGMGGMDY
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtaccgtttcgccaccagtctcgcttccaaggctcggatcgctaggaacagcacccat
cagattggtagtaggctgaactggagcagaaactatgctgctaaagacatcagattcggg
gttgaggctcgagccttgatgcttaagggcgtggaagagctcgcagatgctgttagagtc
accatgggccccaaggggcgtaacgtggtactagagcaaagttttggtgccccaaaagtg
acaaaagatggtgtaactgttgcaaaaagcattgagttcaaggatcgaatcaagaatgtt
ggtgcaagccttgtgaaacaggttgcaaatgccactaatgatgtagcaggagatggtacc
acctgtgccacagtccttacccgagcaatatttactgaagggtgcaagtcggttgctgct
ggaatgaatgcaatggacctaagaaggggtatctcgatggcagtagatgctgtagtgaca
aacttgaaaagcagagctaagatgatcagcacatctgaagaaatagcacaggttgggaca
atatcagcaaatggtgagagagaaattggtgaattgatcgcaaaggctatggagaaagtt
ggcaaagagggagtaatcacaatttcagatgggaagacattgtataatgaattggaagtt
gttgaggggatgaagctggatagaggttacatatccccttattttataacaaaccagaaa
acccaaaaatgtgaactagaaaatcctcttgttctaatccatgagaagaaaatctcgaat
atacatgctgttgtgaaagtgctagagatggcattaaagactcagaggcctttactgatt
gttgctgaagatgtggaaagcgaagcactggccactcttattctaaataagcttcgtgct
ggaatcaaggtctgtgccatcaaagcacctgggtttggagagaacaggaaggccgccctg
caggatctggcaactctcacaggaggggagcttataacggaagagcttggtttgaacctt
gagaaggcagaactggatatgcttggcacttgcaaaaaggttacaatatctaaggacgat
actgttatccttgatggggctggtgacaagaaggccattgaggaacggtgtgagcagatt
aggtcagccattgaattgagcacttctgattatgacaaggaaaagttgcaagaaaggttg
gccaagctttctggtggtgttgctgtcttgaagataggaggagctagtgaagctgaagtt
agtgagaagaaagatagggttacagatgctctaaatgctactaaggcagctgtagaagaa
ggaattgtaccaggtggtggcgtggcacttctttatgcttccaaagagttggacaaactg
ccaacatcaaactttgatcagaagattggtgttcagattatccagaatgctctgaaaaca
cctgtgttcacaattgcttctaatgctggagttgagggggctgttgtggttgggaagctg
ttggagcaggataaccctgatcttggatatgatgcggccaaaggtgaatatgttgatatg
gtcaaagctggaattattgatccactgaaagtaattagaacagctttggttgatgctgca
agtgtgtcatcgttgatgacaacaactgaagctgttgtggttgaactgccaaaggatgag
aaggaagttcctgcaatgggaggtggcatgggtggcatggactactaa

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