KEGG   Vitis vinifera (wine grape): 100244360
Entry
100244360         CDS       T01084                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vvi03000]
    100244360
   03036 Chromosome and associated proteins [BR:vvi03036]
    100244360
Transcription factors [BR:vvi03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    100244360
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100244360
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII AAA_34 Helicase_C_2 N36
Other DBs
NCBI-GeneID: 100244360
NCBI-ProteinID: XP_010660170
LinkDB
Position
14:complement(join(12688579..12688969,12696682..12696950,12697090..12697168,12697264..12697467,12718458..12718684,12718947..12719011,12721955..12722090,12724111..12724414,12724504..12724559,12724651..12724800,12748634..12748775,12752432..12752598,12759674..12759793,12760991..12761206,12761284..12761374,12762018..12762307,12764133..12764738,12770082..12770165,12777849..12777962,12778745..12778991,12779070..12779260,12792368..12792460,12792540..12792635,12792719..12792781,12792954..12793073))
AA seq 1506 aa
MDEEHEEVEDVESSSSDSFIDDLDNNESMTSGQDDGLHLEVTLTEEEIEELIAEFLDVES
KAAEAQESLEEESLSKLEIEVREELAQTLQGNDLETAVAEEMANFKEEWEAVLDELETES
AHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKHL
QTDRPVRRRHGKLLEEGASGYLANKLASDGNREAVTENAEVDWCSFNKCFSDHASEDSTL
FGSEHWASVYLASTPQQAAVMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSE
EQKKKFKKVKEEDDANIDRKLQLHLKRRRYRKRSTQETIQKEDRLAENILDNSVLLNDYS
QAVLREKTRGDGVSISNNNDDGACQSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVL
PDSTETKGFKRSHDNGELDVDNKRFRTVIIDSDDETHEVGNVSNSLVNNMTKMEGQSVLQ
ETEGDFVGSGSLPSKHMNGNFHCTACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKDP
DCSECYCGWCGRSNDLVGCKSCKTLFCITCIKRNIGEECLSDVKASGWQCCCCSPSLLQQ
LTSELEKAIGSSSLTVSSSDSDSDDSDEDINVAISSKRRRKKKIRRILDDAELGEETKRK
IAIEKERQERLKSLQVQFSEKSKMMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGE
EAVRIPPSISAKLKVHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA
FLYTAMRSIDLGLRTALIVTPVNVLHNWRQEFIKWRPLELKPLRVFMLEDVSRERRAELL
AKWRAKGGVFLIGYSAFRNLSLGKNVKDRHMAREICYALQDGPDILVCDEAHMIKNTRAD
TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHM
NSTSDDVKIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVMAVKLSSLQRKLYKRF
LDVHGFTNDKVSSDKIRKRCFFAGYQALAQIWNHPGILQLTKEEKDYARREDGVENFLAD
DSSSDDNIDYNTVLGAEKVRNKNEIQQGKVDSGLYQKGWWNDLLHENNYKEVDYSGKMVL
LLDILTMCADVGDKALVFSQSLSTLDLIEYYLSKLSRQGKKGKCWKQGKDWYRLDGRTEG
SERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW
RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFDFGD
DENPDILPERGKEEEHTTNQNMTGQVGNSLKDKLSLSHGSCSSDKLMESLLVRHYPRWIA
NYHEHETLLQENEEEKLSKEEQDMAWEVYRRTLEWEEVQRVPLDESTFERKPAVSNAAPL
VTESISLSETKISRLRNHLVQRKCTNLSHMLTLRSQGTKVGCSTVCGECAQEISWEDLNR
DGRAVR
NT seq 4521 nt   +upstreamnt  +downstreamnt
atggacgaagaacatgaggaagtggaagatgtcgagagtagttctagtgattctttcatt
gatgatttagacaacaatgaatcaatgacatctggtcaagatgatggattgcatcttgag
gtcactttgactgaggaagaaatagaagagttaattgctgaattcttggatgttgagagt
aaggctgcagaggcccaagaatcacttgaagaggaatcactttccaaattggagattgaa
gttagagaagagttggcacaaacccttcaagggaatgatttggaaacggctgttgcagag
gaaatggcaaattttaaggaagagtgggaagctgtgcttgatgaacttgagactgagagt
gctcacttgttggaacaacttgatggggctggtattgaattaccaagtctctataagtgg
attgaaagtcaggctcctaatggttgttgcactgaagcttggaaacaaagggtacattgg
ataggatctcaggtgactggtgatactactgaatcaatcatagaagctgaaaagcatctc
caaactgacaggccggtgcgaagacgacatggaaaactattggaggagggtgccagtgga
tatctggcaaacaaacttgctagtgatgggaacagagaggctgtcacagagaatgcagaa
gtggattggtgctctttcaacaaatgtttttctgatcatgcatctgaggatagtacttta
ttcggcagtgagcactgggcttctgtgtacttagcaagtactccacagcaagcggcagtg
atggggctcaaatttcctggagttgatgaggtggaggagatcgatgatattgatggcaat
tcaagtgatccatttgttgcagatgccatagcgaatgaaagagccgtggatctttctgaa
gaacagaagaaaaaatttaaaaaggtgaaagaggaagatgatgcaaatatagatcggaag
cttcaacttcatttgaaacgtaggagatatagaaagagaagtacacaggaaaccattcag
aaagaagatcggttggcagaaaacatcttagacaattctgtgcttttgaatgactactct
caggctgttttgagagagaaaactcgtggggacggggtaagtatatctaataataatgat
gatggtgcatgtcaaagttcgaaaactgaggtgtcggaaagtcttgaaatgcctgacact
cttgacaaagaaaggcctgcaagtaatggcaattcttcggtgctttctggctctgttttg
cctgattcaactgaaaccaaaggattcaagcgttcacatgacaatggggaacttgatgtt
gataataagaggtttcggactgttatcatagatagtgatgatgaaactcatgaggtgggc
aatgtatccaattctcttgttaacaatatgactaagatggagggtcagtctgttttgcaa
gaaactgaaggtgattttgttggttctggttctcttccttcaaagcatatgaatgggaat
tttcactgcactgcttgtaataaagtggctattgaagtgcactgtcatcctcttctgaaa
gtaatcatctgtggggattgcaaatgtttaattgagagaaagatgcatgttaaggatcct
gattgctctgagtgttattgtggatggtgtggacggagcaatgacttggtaggttgtaag
tcatgtaaaacattattctgtattacgtgtataaagaggaacatcggcgaagaatgcttg
tcagatgtcaaagcaagtggctggcaatgttgttgctgctctccaagtcttctgcaacaa
ttgacttcggagttagaaaaagccattggatctagtagtctgacagtttctagctctgat
agtgattcagatgattcagatgaagatatcaatgttgcaatcagctccaaacgaagaagg
aaaaagaaaattcggaggattcttgatgatgctgagttaggggaagagaccaaaagaaaa
attgcaatcgaaaaggaacggcaagaacgtctcaagtctctacaagtgcagttttccgag
aaatccaagatgatgaatgctgcaagttgcaatggtaatttatcagaggatactagtgtt
gaagttctaggtgatgcttcgaaaggttatatagtgaatgttgtgagggaaaaaggtgaa
gaagctgtgaggattcctccaagcatctctgccaaattgaaagtccatcagatcacaggg
atacgatttatgtgggaaaatattatccagtccattagaaaagtgaaatctggtgataaa
ggtcttggttgcattctagctcacaccatggggcttggtaaaacttttcaggtgatagct
ttcttatatactgcaatgagaagtattgacttaggattaagaactgcacttatcgttaca
cctgtaaatgtgctgcacaattggcgacaggagttcataaaatggagacctttggaattg
aagcctcttcgtgtcttcatgttggaagatgtttcaagggagagaagagcagaattgctt
gcaaagtggagagctaagggtggtgtctttttaatcggctatagtgcattcagaaactta
tcccttgggaagaatgtgaaagatcgccatatggctagagaaatttgctatgccctgcag
gatggaccagatatactggtctgtgatgaggcccacatgatcaagaacaccagggctgat
acaactcaagccttgaaacaagtgaagtgccagaggcggattgcattgactggatcacct
cttcaaaacaatctcatggaatattattgtatggttgattttgtaagagaaggattcctt
ggaagtagccatgaattccgaaaccgcttccaaaatcctatagagaatggacaacatatg
aactccacatcagatgatgtaaaaataatgaatcagaggtctcatatcctctatgaacaa
ctaaaagggtttgtccaaagaatggacatgagtgtggtcaagaatgacttgccccctaaa
actgtttttgtaatggctgtaaagctttcttccttacaacggaaattatacaaaagattc
cttgatgtgcatggcttcacaaatgacaaggtttctagtgacaagataaggaagagatgt
ttttttgctgggtatcaggccttagctcagatatggaaccatcctgggatcttgcaattg
acaaaagaagaaaaagactatgcaagacgtgaagatggtgttgagaattttcttgcagat
gacagctctagtgatgataatatagattacaatactgttcttggagcagagaaggtgagg
aacaagaatgagattcaacaaggaaaagtcgatagtggcttatatcagaagggttggtgg
aatgatcttctccatgaaaataattataaagaggttgattacagtggcaaaatggttttg
ctgcttgatatcctaaccatgtgtgctgatgtgggtgataaggctctggtttttagtcag
agcttatcaactctagatctgatagaatattatctttcaaaattatcacggcaagggaag
aaagggaaatgttggaagcaaggaaaagactggtacaggctagatggaagaacagagggc
tctgaaaggcaaaagctagtagagagatttaatgaccccttaaataaaagggtgaaatgc
actttgatatccacccgagctggatctttgggaatcaatcttcattctgctaaccgtgtc
atcattgttgatggatcatggaatccaacatatgatcttcaggctatatatcgggcttgg
aggtatggccaaactaagccagtgtttgcttaccgattgatggctcatggaactatggaa
gaaaaaatttataagcgtcaggtgacaaaggaaggccttgctgccagggtggtcgataga
caacaagtacataggactatctctaaagaggagatgttacatctctttgattttggtgat
gatgagaaccctgatattttacctgagaggggcaaagaggaagagcatacaaccaaccaa
aatatgactggtcaagttggaaattcgctaaaggataaattatctctttctcatggaagc
tgctcttctgacaagttaatggaaagtttacttgtcaggcattatccacggtggattgct
aactaccatgaacatgagacccttctgcaagagaatgaagaggagaagctatcaaaagag
gagcaagacatggcttgggaagtatatcggagaactttagaatgggaagaagtacagcga
gtaccccttgatgagtctacatttgagcgaaaaccagctgtttcaaatgcagcccccctt
gtaacagagagcatcagtctctcagagaccaagattagtagattgaggaatcatttggtg
cagcggaaatgcaccaacctttctcacatgctgactcttagaagtcagggcacaaaagtt
ggttgcagtactgtatgtggggaatgtgcacaagaaataagctgggaggaccttaatagg
gatggcagggcagtaaggtga

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