KEGG   Vitis vinifera (wine grape): 100244967
Entry
100244967         CDS       T01084                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03082  ATP-dependent chromatin remodeling
vvi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100244967
   03083 Polycomb repressive complex
    100244967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100244967
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100244967
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100244967
   HDAC complexes
    Sin3A-HDAC complex
     100244967
    BRAF-HDAC complex
     100244967
    REST complex
     100244967
    SHIP complex
     100244967
    MiDAC complex
     100244967
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100244967
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100244967
  Chromatin remodeling factors
   NuRD complex
    100244967
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100244967
NCBI-ProteinID: XP_019080589
UniProt: D7TSU0 A0ABY9DA85
LinkDB
Position
14:complement(join(18255072..18255179,18255291..18255362,18255839..18255896,18255979..18256049,18257358..18257588,18269458..18269898,18272006..18272533))
AA seq 502 aa
MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI
DDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHQLLDEIRAKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEI
DDERKSLPGRVKREIVEPESKDLEDKKGVAEHSRGFDTTAEETACSKASDVCPMPIDEPS
VKVEQESLNKPFDQPAPTFPKS
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggatacgggaggcaattcccttccatctggagctgatggggtgaagagaaaagtgtca
tatttctatgatccagaggttggaaattactactatgggcagggccaccccatgaagcca
cataggattagaatgacacatgctcttctagcccactatggattgcttcagcatatgcag
gttctgaagccctgtcctgccagagatagagatctttgccggtttcatgcggatgattat
gtctcttttctgaggggtatcacccctgaaacacaacaggatcagctgaggcaactaaag
cgtttcaatgttggtgaagactgccctgtatttgatggtctctactctttctgtcaaact
tatgctggtgggtcagttggtggtgcggtcaagctaaatcatggtttctgtgatattgct
atcaactgggctggtgggctgcatcatgctaagaagtgtgaggcttctggattttgctat
gtgaatgacattgtcctggcaatcttggagcttcttaaacagcatgagcgtgttttatac
gtggatatcgatatccaccatggagatggtgtggaggaggctttctacacaactgacagg
gtcatgactgtttcatttcacaaatttggtgattattttcctggtacaggggatatacgt
gatattggatttgggaaagggaaatattactcccttaatgttccattagatgatgggatt
gacgacgagagctaccattgcttgttcaaaccgataattggaaaagtgatggaaattttt
agacctggtgctgtggttctccagtgtggtgctgactccttatctggggacaggttagga
tgcttcaatctttcaatcaaaggtcatgcagagtgtgttcggtttatgagatcattcaat
gtgccactattgctgctgggtggtggtggttacaccatcaggaatgttgctcgttgctgg
tgctatgagacgggagttgcgcttggaatagaagttgatgacaagatgccacagcatgag
tactacgagtattttggtccggactatactcttcatgttgccccgagtaacatggaaaat
aaaaattcacaccagttactggatgaaataagggctaagcttctcgacaatctatcaaca
cttagacatgcacctagtgtccaatttcaggaaagaccccctgatacagagctccctgag
gctgatgaagaccacgacgatggagatgagagatgggatccagattctgacatggaaatt
gatgatgagcgtaagtctctaccaggcagagtaaagagagaaattgtcgaaccagagagt
aaagatttggaggacaagaaaggagttgctgagcactcaagaggctttgatacaactgcg
gaggagactgcatgctcaaaggcttcagatgtgtgccctatgccaatagatgaaccaagt
gtgaaagttgaacaagagagcttgaacaagccatttgatcagcctgccccgacgttcccg
aagtcatga

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