Vitis vinifera (wine grape): 100245377
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Entry
100245377 CDS
T01084
Name
(RefSeq) autophagy-related protein 13B
KO
K08331
autophagy-related protein 13
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100245377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100245377
03029 Mitochondrial biogenesis [BR:
vvi03029
]
100245377
Membrane trafficking [BR:
vvi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100245377
Atg1 complex
100245377
Mitochondrial biogenesis [BR:
vvi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100245377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100245377
NCBI-ProteinID:
XP_002276481
UniProt:
D7U420
LinkDB
All DBs
Position
4:join(23553793..23555169,23555248..23555429,23559363..23559786)
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AA seq
660 aa
AA seq
DB search
MASLGNMNSEPPEIEQIVTEFFAKSLHIILESRSPYASSRNYSGDPTISPSSSSSSSSSV
RPRDKWFRLALRDCPAALENIDFWRQSNLEPMVVDVILVQRPHDWDPINCIPRRDLLRNT
SLKEQSRNSWGSEQEEFGCVAKSEKIIERWVVQYESRKNSSLGSKRSSNSNSHNLLKIQH
TLYKKSIILLRSLYLTVRLLPAYKLYHDLNSSQIHAFTLAHRVSSIIEPFTGREEVEMQR
FCFTPVDTCCGRLCLSVLYRASLLDVSSEPSTPMSPQVIADYVGSPMADPLKRFPSLPTT
CSPSSAPFSRRHSWSYDLYRASPPSVSFSPSPTHSESRASVSNPASRRLPPMSLPPHPPE
MSAAHHKNTGFDEYWPSPTISPPSSASPPTNTLGSHLPKSLLRSESAPVSIPATKPVNTP
ALPYKHNLPPSPPLKGAGCSNSKTDRRTCQIRTGTTVDKISIGKDETGKISGLKISSGSS
QPVSVSRSSSRLSLPDDFDGSEFSCPFITDDDDVTDSYRRPESYDHKRYRHEPVEPGGVL
RVPKSQGAEVGALVLMLKTAAPLCQDLSSSTNFSQAPRSETWNNSIQPPDQISEAPAVQD
ATSSRVASSGLVFSKTTADALEELKVYKDMKNDLIKQGLRSQTSTNLASAAEVSSRGTTG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcggaaacatgaactcagaaccaccagaaatcgaacaaatagtcactgaa
ttctttgcgaaaagtctccacataatactggagtcgaggtctccttatgcgtcctcaagg
aattacagtggagacccaactatatctccttcttcttcatcctcctcctcctcgagtgtg
aggccacgagataagtggtttagattagcattgcgggactgcccagcggcactagagaat
attgatttctggcgccaaagcaatcttgaaccaatggtggtggatgtgattttggttcag
cgaccacatgactgggacccaataaattgtattccaaggagggatcttcttaggaatact
tcattgaaggagcagtctcgaaattcttggggttctgagcaggaagagtttgggtgtgtg
gcaaagagtgaaaagatcatagagagatgggtagtgcaatatgagagtcgaaagaatagt
agtctggggagtaagagatcgagtaattcaaattcacacaatttacttaagatacagcac
acattatataagaaatcgataatactattgaggtctttgtatttaactgttaggctttta
cctgcatacaaactataccatgatctcaattcctctcaaattcatgcatttactcttgct
catcgggtatcttctattattgagcctttcactggtagagaagaagtagaaatgcagcga
ttttgcttcacccctgtggacacttgttgtggtaggctctgtctttctgtattgtatcgt
gcctcactcttggatgtgagttctgaaccatcgacccccatgtccccacaagttatagct
gattatgttggaagtccaatggcggatccccttaagagatttccatcccttcccacgaca
tgttctccatcttcggcaccattctcaaggcggcatagttggagctatgacctttataga
gcttcgcctccttcagtttctttctcaccttctcctacacattcagagtctcgtgcttca
gtttctaaccctgcttcccggcgtctcccgcctatgagcttgcctcctcatccacctgaa
atgtctgcagctcaccacaagaatacaggttttgacgagtattggccttccccaacaatt
tctcccccctcctctgcatcgccaccaacaaatactctgggtagtcatctgccaaaatca
cttttacgttctgaaagtgctcctgttagcatacctgcaaccaagcctgttaatactcct
gctttgccctacaaacataatttgcctccctctcctcctcttaaaggtgctgggtgcagt
aattctaagactgatagaaggacatgtcaaattcgaactggtacaacagttgataagatc
tctattgggaaagatgaaactggaaaaatttctgggttgaagatatcatctggtagctca
caaccggtttcggtttcccgaagctccagtaggttgtctctcccagatgattttgatggt
tctgaattttcctgcccatttatcacggatgatgatgatgtgacagactcataccgtaga
cctgagtcttatgatcataaaagatatagacatgagcctgttgagccagggggagtattg
cgagtcccaaagtcccaaggtgctgaagttggtgctcttgtactgatgttgaagacagct
gctcctctttgccaagacttgtccagttccacaaatttttcacaagcccccaggtctgaa
acatggaacaacagcatccaaccacccgaccagatctctgaggcaccagcagttcaggat
gctacttcttcaagggtagcgtcttctgggcttgttttctcaaagacaacagctgatgca
ctagaggagctcaaagtttacaaggatatgaaaaatgatttgatcaagcaaggtcttagg
tcccagacatcgactaatttggcttcagctgcagaagtttccagcagaggtacgaccgga
tga
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