Vitis vinifera (wine grape): 100245428
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Entry
100245428 CDS
T01084
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100245428
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100245428
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100245428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
100245428
NCBI-ProteinID:
XP_002265670
UniProt:
A0ABY9BTB9
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All DBs
Position
4:join(21567316..21567445,21567717..21567947,21568638..21569030,21569476..21569606)
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AA seq
294 aa
AA seq
DB search
MSTAAAKALAGILVFVSYSVRLTYAIVHLKSLSASFIDAPARFAVSVNSTGICGALHLAD
PLEACSSLLNRFRSQEIDTIKFALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVS
MIGNSQGIWVPAVFVSKAAGETLKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIA
TVVLTFFLTRNRRLNQRGTNPHRPSVDAKLVEVLPCFTFSQACECRVGDTCSICLEDYKD
GERLRVLPCQHEFHASCVDSWLTKWGTFCPVCKYDLSTDATCSKVNERRTFLFF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgctgcagccaaagcccttgctggaattctagtgtttgtttcttactctgtt
cgcctcacctacgctattgttcacctcaaatccttgtccgcttccttcattgacgctccc
gccagatttgctgttagtgttaacagcactggaatatgcggagctttgcatttggcagat
cctctcgaggcatgttcttctctgctcaacaggtttcgatcccaagaaattgatacaata
aaatttgctctgataattaggggtaaatgtgcttttgaggataaagtccgaaatgctcaa
gatgctggctttcatgctgtaatcgtgtatgatgatcgagataaggggaatttggtttcc
atgataggaaactcccagggcatatgggtgcctgcagtttttgtttctaaggcagctggt
gaaaccctgaagatatatgctcaaggacaagaaggggaatgctgcattataaacccttca
ttcccagaatctgcctggactgtgatggtaatatctttcatctcacttcttgtcatagca
actgtcgtgttaacgttcttcctcactcgcaaccgccggttgaatcaacgaggaacaaat
ccccaccgtcctagtgtggatgccaagttggtggaagttcttccctgctttacattcagt
caagcatgtgagtgccgcgtaggagatacatgttccatctgtcttgaggactacaaagat
ggtgaacggctcagagttctcccctgccaacatgaatttcacgcgagctgtgtggactca
tggcttacaaagtgggggactttctgcccggtttgtaaatatgatttgagtactgatgcc
acatgttctaaagtgaatgagaggagaacatttttatttttttag
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