Vitis vinifera (wine grape): 100245538
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Entry
100245538 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100245538
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100245538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100245538
Spliceosome [BR:
vvi03041
]
Complex B
Other components
RES complex
100245538
Complex C
100245538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
100245538
NCBI-ProteinID:
XP_002278878
UniProt:
D7TU07
A0ABY9BIB7
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All DBs
Position
2:complement(join(8174156..8174241,8174811..8174991,8175087..8175159,8175484..8175587,8191277..8191335,8191421..8191488,8192760..8193444,8193527..8193713))
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AA seq
480 aa
AA seq
DB search
MAASTSLKEYLKRYESNNEEETKKKKKKKKKTKPDVSGVLVVDEDPTWQKPVKLEEEHDD
SADEEKPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHSDSGDQNSDVS
PPRRQRARYDTPSPEPEPRPSDSGREGSDLSPPRQRQRRYHTPSPEPGSKPSGSDFSPSR
RPRRQTSADVERKNSDSPHFPHISSPRRVGRSSEHQDLSPPRKRRKGLGLSGSPDISPPR
RSTQTDTPDLSPPRKSRKDVSSSKEPSKTGLISGKDIGELNAKTKKNDWLRFKEMDPLIS
GRGAEPVYRDKRKGDRISKEEFLKSQKGEEKPKEKKLEWGKGLAQKREAETKQQELELEK
DKPFARTRDDPELDKILKDRVRWGDPMAHLVKRKNSELILPDLGDGEKMKESGFIIPQEI
PSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSTGFEKQMFKRTNEKQATEREAYLWSVADM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcgacttccttaaaagaatatctgaaacgatatgaaagcaacaatgaagag
gaaacaaagaaaaagaagaaaaagaaaaagaaaaccaaaccagatgtctcaggtgtcctt
gttgttgatgaagatccaacatggcaaaaaccagttaagcttgaagaagaacatgatgat
tcagcagatgaagagaaaccccaaattgatgaagacattgaagttaagcggatgaagaga
ctagagcaacttaggtccaaacgtccttatcatgccctttctgaggatgggagtggttgg
gtttcaatttctgctgctcctacacattctgattctggtgaccaaaattctgatgtgtcc
ccgcctcgtaggcagagagctcgttatgacacaccttcaccagaacctgaacccaggcct
tcagattcgggcagagaaggttccgacttgtcaccaccacggcagcggcaaagacgttac
catactccgtcaccggaaccgggaagtaaaccatcaggttctgatttctctccttctcgt
cgacctcgtcggcagacctcagcagatgttgaaaggaagaactctgattcaccccatttt
cctcacatttcttccccacgtcgtgttggccgcagttctgaacatcaagatctttcaccc
ccaaggaaaaggagaaagggtcttgggttgtctggatcacctgatatttctcctccacga
cgttctactcagactgatactccagatctttcccctccaaggaaaagccgtaaggatgtt
tcttcctcaaaagagccgtcaaaaactggtttgattagtggtaaagatatcggggaactg
aatgctaaaactaagaagaatgattggttaaggttcaaagagatggatcctttgataagt
ggacgaggtgcagaacctgtttatcgtgacaagagaaaaggagatcgcatatcaaaggag
gaattcttgaagtcacaaaagggagaagaaaagcctaaggagaaaaagttggaatggggc
aagggcttggctcaaaagcgggaagctgaaactaagcagcaagaattagaacttgagaag
gacaaaccatttgctcggaccagagatgatccagagctcgataaaatactgaaggataga
gtaagatggggtgatcctatggcacatttagtgaagagaaagaattctgagctgattctg
ccagacctgggggatggtgagaagatgaaagaatcaggatttataattcctcaagaaatt
cctagtcacagctggataaaacgaggattagatgctgcaccgaatcgatatggtataaga
ccagggaggcactgggatggcgtcgatcggagtactggttttgagaagcagatgtttaaa
agaacgaatgagaaacaagctacagagagagaagcttatctctggtctgtggcagatatg
tga
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